Information for 20-GRAGGMRRMTTCTAMM (Motif 33)

A C T G C T A G C T G A A C T G A C T G G T C A C T G A C T A G G T C A A C G T A C G T A T G C A C G T C G T A G T A C G T A C
Reverse Opposite:
A C T G A C T G A C G T C G T A A T C G C G T A C G T A A C G T G A C T A G C T A C G T A G T C A G T C A G C T A G T C A G T C
p-value:1e-5
log p-value:-1.378e+01
Information Content per bp:1.824
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets34.7 +/- 19.1bp
Average Position of motif in Background70.9 +/- 10.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:1
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GRAGGMRRMTTCTAMM-
--TAGAANVTTCTAGAA
 A C T G C T A G C T G A A C T G A C T G G T C A C T G A C T A G G T C A A C G T A C G T A T G C A C G T C G T A G T A C G T A C A C G T
A C G T A C G T G A C T C T G A T C A G T G C A C G T A A T G C T A C G G A C T C A G T A G T C G A C T C T G A C A T G T C G A C T G A

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GRAGGMRRMTTCTAMM
AGGGAAGTCATTTCT---
 A C G T A C G T A C T G C T A G C T G A A C T G A C T G G T C A C T G A C T A G G T C A A C G T A C G T A T G C A C G T C G T A G T A C G T A C
C T G A C T A G C T A G T C A G C G T A C T G A C T A G A G C T G T A C C T G A A G C T A G C T A C G T G A T C G A C T A C G T A C G T A C G T

HSF2/MA0770.1/Jaspar

Match Rank:3
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:GRAGGMRRMTTCTAMM-
----GAANGTTCTAGAA
 A C T G C T A G C T G A A C T G A C T G G T C A C T G A C T A G G T C A A C G T A C G T A T G C A C G T C G T A G T A C G T A C A C G T
A C G T A C G T A C G T A C G T T C A G C T G A G C T A G A T C T C A G G C A T C A G T G A T C A G C T T C G A A C T G G T C A G C T A

PB0194.1_Zbtb12_2/Jaspar

Match Rank:4
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:GRAGGMRRMTTCTAMM----
-----AGNGTTCTAATGANN
 A C T G C T A G C T G A A C T G A C T G G T C A C T G A C T A G G T C A A C G T A C G T A T G C A C G T C G T A G T A C G T A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A T C A G T A G C C A T G C A G T C A G T G T A C A G C T G C T A G C T A A G C T T A C G C T G A A C G T C G T A

HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---GRAGGMRRMTTCTAMM-
NNTTCTGGAANNTTCTAGAA
 A C G T A C G T A C G T A C T G C T A G C T G A A C T G A C T G G T C A C T G A C T A G G T C A A C G T A C G T A T G C A C G T C G T A G T A C G T A C A C G T
A T G C T A G C A G C T A G C T T G A C G A C T T C A G T A C G G T C A C T G A A T C G T A G C G A C T C A G T A G T C A G C T T C G A A T C G T G C A T G C A

HSF1/MA0486.2/Jaspar

Match Rank:6
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:GRAGGMRRMTTCTAMM-
----GAACGTTCTAGAA
 A C T G C T A G C T G A A C T G A C T G G T C A C T G A C T A G G T C A A C G T A C G T A T G C A C G T C G T A G T A C G T A C A C G T
A C G T A C G T A C G T A C G T C T A G G C T A C G T A A G T C T C A G C G A T C A G T A G T C A C G T T C G A A C T G G T C A G C T A

HSF4/MA0771.1/Jaspar

Match Rank:7
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:GRAGGMRRMTTCTAMM-
----GAANNTTCTAGAA
 A C T G C T A G C T G A A C T G A C T G G T C A C T G A C T A G G T C A A C G T A C G T A T G C A C G T C G T A G T A C G T A C A C G T
A C G T A C G T A C G T A C G T T C A G G C T A G C T A A G T C T C A G C G A T C G A T T A G C A G C T T C G A A T C G G T C A G C T A

EBNA1(EBV-virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer

Match Rank:8
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----GRAGGMRRMTTCTAMM
NNNGGGHAGCAHRTGCTRCC
 A C G T A C G T A C G T A C G T A C T G C T A G C T G A A C T G A C T G G T C A C T G A C T A G G T C A A C G T A C G T A T G C A C G T C G T A G T A C G T A C
A T G C A G T C G C A T C T A G A C T G C T A G G A C T C G T A C T A G A G T C T G C A G C A T C T G A A C G T T C A G A G T C A C G T C T A G A G T C A G T C

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:9
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:GRAGGMRRMTTCTAMM--
---AGATGCTRCTRCCHT
 A C T G C T A G C T G A A C T G A C T G G T C A C T G A C T A G G T C A A C G T A C G T A T G C A C G T C G T A G T A C G T A C A C G T A C G T
A C G T A C G T A C G T C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T

PB0090.1_Zbtb12_1/Jaspar

Match Rank:10
Score:0.49
Offset:3
Orientation:forward strand
Alignment:GRAGGMRRMTTCTAMM----
---CTAAGGTTCTAGATCAC
 A C T G C T A G C T G A A C T G A C T G G T C A C T G A C T A G G T C A A C G T A C G T A T G C A C G T C G T A G T A C G T A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A C G T G C T A T C G A A C T G C T A G C G A T C G A T A G T C A G C T T C G A C T A G T C G A G C A T A G T C T G C A A G T C