Information for 11-TTTAATCTAA (Motif 31)

A C G T A C G T A C G T C G T A C G T A A C G T A G T C A C G T C G T A C G T A
Reverse Opposite:
A C G T A C G T C G T A A C T G C G T A A C G T A C G T C G T A C G T A C G T A
p-value:1e-5
log p-value:-1.378e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.3 +/- 24.6bp
Average Position of motif in Background51.4 +/- 15.4bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid3a/MA0151.1/Jaspar

Match Rank:1
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:TTTAATCTAA
TTTAAT----
 A C G T A C G T A C G T C G T A C G T A A C G T A G T C A C G T C G T A C G T A
G C A T A C G T A C G T C T G A C G T A A C G T A C G T A C G T A C G T A C G T

PB0001.1_Arid3a_1/Jaspar

Match Rank:2
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---TTTAATCTAA----
GGGTTTAATTAAAATTC
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A G T C A C G T C G T A C G T A A C G T A C G T A C G T A C G T
T A C G A C T G A C T G G C A T G A C T A G C T C T G A C G T A C G A T G A C T T C G A C T G A C G T A G T C A G A C T G C A T G A T C

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:3
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:TTTAATCTAA
-YTAATCCY-
 A C G T A C G T A C G T C G T A C G T A A C G T A G T C A C G T C G T A C G T A
A C G T G A T C G C A T C G T A C G T A A C G T G A T C G A T C A G T C A C G T

OTX2/MA0712.1/Jaspar

Match Rank:4
Score:0.67
Offset:1
Orientation:forward strand
Alignment:TTTAATCTAA
-TTAATCCT-
 A C G T A C G T A C G T C G T A C G T A A C G T A G T C A C G T C G T A C G T A
A C G T G A C T G C A T C G T A C G T A C A G T G A T C A G T C A C G T A C G T

Pitx1/MA0682.1/Jaspar

Match Rank:5
Score:0.66
Offset:1
Orientation:forward strand
Alignment:TTTAATCTAA
-TTAATCCC-
 A C G T A C G T A C G T C G T A C G T A A C G T A G T C A C G T C G T A C G T A
A C G T G A C T G C A T T C G A C G T A C A G T G A T C G A T C G T A C A C G T

PB0040.1_Lef1_1/Jaspar

Match Rank:6
Score:0.66
Offset:-6
Orientation:forward strand
Alignment:------TTTAATCTAA-
AATCCCTTTGATCTATC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A G T C A C G T C G T A C G T A A C G T
C T A G C T G A C G A T A G T C A G T C A G T C G A C T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G A C

PB0082.1_Tcf3_1/Jaspar

Match Rank:7
Score:0.66
Offset:-6
Orientation:reverse strand
Alignment:------TTTAATCTAA-
NNTTCCTTTGATCTANA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A G T C A C G T C G T A C G T A A C G T
C G A T C G A T C G A T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T C T G A

PB0083.1_Tcf7_1/Jaspar

Match Rank:8
Score:0.66
Offset:-6
Orientation:reverse strand
Alignment:------TTTAATCTAA-
NNTTCCTTTGATCTNNA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A G T C A C G T C G T A C G T A A C G T
C G A T C G A T C A G T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G C A

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:9
Score:0.65
Offset:-6
Orientation:forward strand
Alignment:------TTTAATCTAA-
ATTTCCTTTGATCTATA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A G T C A C G T C G T A C G T A A C G T
C G T A C G A T C A G T A G C T A G T C A G T C G A C T G A C T C G A T A C T G C G T A C G A T T A G C G C A T C G T A C A G T T G C A

PROP1/MA0715.1/Jaspar

Match Rank:10
Score:0.65
Offset:2
Orientation:forward strand
Alignment:TTTAATCTAA---
--TAATTTAATTA
 A C G T A C G T A C G T C G T A C G T A A C G T A G T C A C G T C G T A C G T A A C G T A C G T A C G T
A C G T A C G T G C A T C G T A C T G A G C A T G A C T C G A T G T C A C T G A C G A T G A C T C G T A