Information for 10-AGGCAGTAAT (Motif 25)

C G T A C T A G C T A G A G T C C G T A A C T G C G A T G T C A G C T A A G C T
Reverse Opposite:
C T G A C G A T C A G T G C T A G T A C G C A T A C T G A G T C G A T C A C G T
p-value:1e-7
log p-value:-1.758e+01
Information Content per bp:1.747
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif4.48%
Number of Background Sequences with motif417.9
Percentage of Background Sequences with motif0.91%
Average Position of motif in Targets43.9 +/- 26.2bp
Average Position of motif in Background50.1 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXA5/MA0158.1/Jaspar

Match Rank:1
Score:0.66
Offset:3
Orientation:forward strand
Alignment:AGGCAGTAAT-
---CACTAATT
 C G T A C T A G C T A G A G T C C G T A A C T G C G A T G T C A G C T A A G C T A C G T
A C G T A C G T A C G T G T A C C T G A A T G C C G A T C G T A C T G A A C G T A C G T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:AGGCAGTAAT--
--GCAGTGATTT
 C G T A C T A G C T A G A G T C C G T A A C T G C G A T G T C A G C T A A G C T A C G T A C G T
A C G T A C G T C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T

PH0158.1_Rhox11_2/Jaspar

Match Rank:3
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---AGGCAGTAAT----
AGGACGCTGTAAAGGGA
 A C G T A C G T A C G T C G T A C T A G C T A G A G T C C G T A A C T G C G A T G T C A G C T A A G C T A C G T A C G T A C G T A C G T
C G T A T C A G C A T G G T C A G A T C C T A G T A G C C A G T C T A G G A C T G C T A C G T A G C T A C T A G T A C G T C A G G C T A

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:4
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AGGCAGTAAT
-GGCVGTTR-
 C G T A C T A G C T A G A G T C C G T A A C T G C G A T G T C A G C T A A G C T
A C G T C T A G C T A G A G T C T C A G A C T G A C G T A C G T C T G A A C G T

Rhox11/MA0629.1/Jaspar

Match Rank:5
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---AGGCAGTAAT----
AAGACGCTGTAAAGCGA
 A C G T A C G T A C G T C G T A C T A G C T A G A G T C C G T A A C T G C G A T G T C A G C T A A G C T A C G T A C G T A C G T A C G T
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

PH0157.1_Rhox11_1/Jaspar

Match Rank:6
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---AGGCAGTAAT----
AAGACGCTGTAAAGCGA
 A C G T A C G T A C G T C G T A C T A G C T A G A G T C C G T A A C T G C G A T G T C A G C T A A G C T A C G T A C G T A C G T A C G T
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AGGCAGTAAT
CWGGCGGGAA-
 A C G T C G T A C T A G C T A G A G T C C G T A A C T G C G A T G T C A G C T A A G C T
T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A A C G T

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:8
Score:0.57
Offset:2
Orientation:forward strand
Alignment:AGGCAGTAAT--
--CCWGGAATGY
 C G T A C T A G C T A G A G T C C G T A A C T G C G A T G T C A G C T A A G C T A C G T A C G T
A C G T A C G T A T G C G A T C C G A T C T A G A C T G G C T A C G T A A G C T A C T G A G C T

ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer

Match Rank:9
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---AGGCAGTAAT
ANCAGGAAGT---
 A C G T A C G T A C G T C G T A C T A G C T A G A G T C C G T A A C T G C G A T G T C A G C T A A G C T
C G T A T G A C T A G C T G C A A C T G A C T G C G T A C G T A T C A G G A C T A C G T A C G T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:AGGCAGTAAT--
-TGCTGTGATTT
 C G T A C T A G C T A G A G T C C G T A A C T G C G A T G T C A G C T A A G C T A C G T A C G T
A C G T C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T