Information for 13-TTATAAAGCAGGA (Motif 24)

A G C T A C G T C T G A A C G T G T C A C G T A C G T A A C T G T A G C G C T A A C T G A C T G C T G A
Reverse Opposite:
G A C T A G T C G T A C C A G T A T C G T G A C G C A T A C G T A C G T G T C A G A C T G T C A C T G A
p-value:1e-7
log p-value:-1.820e+01
Information Content per bp:1.694
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif3.30%
Number of Background Sequences with motif204.1
Percentage of Background Sequences with motif0.45%
Average Position of motif in Targets55.2 +/- 25.5bp
Average Position of motif in Background50.2 +/- 23.5bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:1
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:TTATAAAGCAGGA---
------ANCAGGATGT
 A G C T A C G T C T G A A C G T G T C A C G T A C G T A A C T G T A G C G C T A A C T G A C T G C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:2
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TTATAAAGCAGGA
NGYCATAAAWCH---
 A C G T A C G T A G C T A C G T C T G A A C G T G T C A C G T A C G T A A C T G T A G C G C T A A C T G A C T G C T G A
T A C G T C A G G A T C G T A C T C G A G A C T G C T A G C T A G C T A C G T A G A T C G T C A A C G T A C G T A C G T

PB0174.1_Sox30_2/Jaspar

Match Rank:3
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----TTATAAAGCAGGA
TAAGATTATAATACGG--
 A C G T A C G T A C G T A C G T A C G T A G C T A C G T C T G A A C G T G T C A C G T A C G T A A C T G T A G C G C T A A C T G A C T G C T G A
G A C T G T C A C G T A A C T G G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G C A T A G C T A C G T A C G A C G T A C G T

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:4
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:TTATAAAGCAGGA-----
------NDCAGGAARTNN
 A G C T A C G T C T G A A C G T G T C A C G T A C G T A A C T G T A G C G C T A A C T G A C T G C T G A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G C A C T G A T A G C G T C A A C T G A C T G C G T A G C T A T C A G G A C T T C A G T A C G

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.55
Offset:3
Orientation:forward strand
Alignment:TTATAAAGCAGGA--
---CACAGCAGGGGG
 A G C T A C G T C T G A A C G T G T C A C G T A C G T A A C T G T A G C G C T A A C T G A C T G C T G A A C G T A C G T
A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:6
Score:0.54
Offset:7
Orientation:forward strand
Alignment:TTATAAAGCAGGA----
-------ACAGGAAGTG
 A G C T A C G T C T G A A C G T G T C A C G T A C G T A A C T G T A G C G C T A A C T G A C T G C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G

PB0187.1_Tcf7_2/Jaspar

Match Rank:7
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----TTATAAAGCAGGA
NNNTTTNTAATACNG--
 A C G T A C G T A C G T A C G T A G C T A C G T C T G A A C G T G T C A C G T A C G T A A C T G T A G C G C T A A C T G A C T G C T G A
C G A T C A G T C T A G C A G T C A G T C G A T T G C A A G C T G T C A C G T A C G A T C G T A G T A C T C A G C A T G A C G T A C G T

HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer

Match Rank:8
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--TTATAAAGCAGGA
GGCCATAAATCA---
 A C G T A C G T A G C T A C G T C T G A A C G T G T C A C G T A C G T A A C T G T A G C G C T A A C T G A C T G C T G A
C T A G T A C G A G T C G T A C T C G A A C G T G T C A G C T A G C T A C G A T A G T C G C T A A C G T A C G T A C G T

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:9
Score:0.53
Offset:6
Orientation:forward strand
Alignment:TTATAAAGCAGGA---
------NACAGGAAAT
 A G C T A C G T C T G A A C G T G T C A C G T A C G T A A C T G T A G C G C T A A C T G A C T G C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G C A C T G A A G T C G T C A A C T G A C T G C G T A C G T A C T G A A G C T

ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer

Match Rank:10
Score:0.53
Offset:6
Orientation:forward strand
Alignment:TTATAAAGCAGGA---
------ANCAGGAAGT
 A G C T A C G T C T G A A C G T G T C A C G T A C G T A A C T G T A G C G C T A A C T G A C T G C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A T G A C T A G C T G C A A C T G A C T G C G T A C G T A T C A G G A C T