Information for 7-CGCCGTAGGAACC (Motif 10)

G T A C A C T G A G T C A T G C A C T G A G C T C G T A A C T G A C T G C G T A C G T A G T A C A G T C
Reverse Opposite:
A C T G A C T G A C G T A C G T A G T C A G T C A C G T C T G A A G T C A T C G A C T G A G T C A C T G
p-value:1e-9
log p-value:-2.193e+01
Information Content per bp:1.937
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets61.5 +/- 26.9bp
Average Position of motif in Background6.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0054.1_Rfx3_1/Jaspar

Match Rank:1
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----CGCCGTAGGAACC------
TGTGACCCTTAGCAACCGATTAA
 A C G T A C G T A C G T A C G T G T A C A C T G A G T C A T G C A C T G A G C T C G T A A C T G A C T G C G T A C G T A G T A C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C A T G A G C T A T C G G T C A G A T C T G A C A T G C G A C T A G C T T C G A C T A G G A T C C T G A C G T A A G T C T A G C T C A G C G T A G C A T G C A T G C T A G C T A

PB0055.1_Rfx4_1/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CGCCGTAGGAACC--
TACCATAGCAACGGT
 G T A C A C T G A G T C A T G C A C T G A G C T C G T A A C T G A C T G C G T A C G T A G T A C A G T C A C G T A C G T
A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CGCCGTAGGAACC--
CCGCATAGCAACGGA
 G T A C A C T G A G T C A T G C A C T G A G C T C G T A A C T G A C T G C G T A C G T A G T A C A G T C A C G T A C G T
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CGCCGTAGGAACC-
--SCCTAGCAACAG
 G T A C A C T G A G T C A T G C A C T G A G C T C G T A A C T G A C T G C G T A C G T A G T A C A G T C A C G T
A C G T A C G T A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G

Rfx1/MA0509.1/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CGCCGTAGGAACC
GTTGCCATGGCAAC-
 A C G T A C G T G T A C A C T G A G T C A T G C A C T G A G C T C G T A A C T G A C T G C G T A C G T A G T A C A G T C
C T A G A C G T G A C T A C T G A G T C A G T C G C T A G C A T C T A G C T A G G T A C C T G A C T G A A G T C A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:6
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CGCCGTAGGAACC
---CSTGGGAAAD
 G T A C A C T G A G T C A T G C A C T G A G C T C G T A A C T G A C T G C G T A C G T A G T A C A G T C
A C G T A C G T A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:7
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CGCCGTAGGAACC
TTGCCATGGCAACN
 A C G T G T A C A C T G A G T C A T G C A C T G A G C T C G T A A C T G A C T G C G T A C G T A G T A C A G T C
A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A A G T C T G A C

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CGCCGTAGGAACC
AGCCTCAGGCA--
 G T A C A C T G A G T C A T G C A C T G A G C T C G T A A C T G A C T G C G T A C G T A G T A C A G T C
G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A A C G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CGCCGTAGGAACC
AGCCTCAGGCA--
 G T A C A C T G A G T C A T G C A C T G A G C T C G T A A C T G A C T G C G T A C G T A G T A C A G T C
G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A A C G T A C G T

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:10
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CGCCGTAGGAACC
ATTGCCTCAGGCAAT
 A C G T A C G T G T A C A C T G A G T C A T G C A C T G A G C T C G T A A C T G A C T G C G T A C G T A G T A C A G T C
C G T A C A G T G C A T T C A G G A T C G T A C A C G T A T G C G T C A C T A G C A T G G T A C C T G A G T C A G C A T