Information for 13-GRCRGCWGTGACTSCY (Motif 28)

A T C G C T A G A G T C C T G A A C T G A G T C C G T A C T A G A C G T A C T G C G T A G T A C G A C T A T C G A G T C A G T C
Reverse Opposite:
C T A G A C T G A T G C C G T A A C T G A C G T A G T C C G T A A G T C G C A T A C T G A G T C G A C T C T A G A G T C A T G C
p-value:1e-7
log p-value:-1.775e+01
Information Content per bp:1.853
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets54.8 +/- 26.4bp
Average Position of motif in Background44.7 +/- 15.1bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:1
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:GRCRGCWGTGACTSCY
----GCAGTGATTT--
 A T C G C T A G A G T C C T G A A C T G A G T C C G T A C T A G A C G T A C T G C G T A G T A C G A C T A T C G A G T C A G T C
A C G T A C G T A C G T A C G T C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T A C G T A C G T

TGIF1/MA0796.1/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GRCRGCWGTGACTSCY
TGACAGCTGTCA-----
 A C G T A T C G C T A G A G T C C T G A A C T G A G T C C G T A C T A G A C G T A C T G C G T A G T A C G A C T A T C G A G T C A G T C
G C A T C A T G C G T A A T G C T C G A A T C G T G A C A G C T T C A G A G C T A G T C C G T A A C G T A C G T A C G T A C G T A C G T

PB0203.1_Zfp691_2/Jaspar

Match Rank:3
Score:0.59
Offset:4
Orientation:forward strand
Alignment:GRCRGCWGTGACTSCY-----
----TACGAGACTCCTCTAAC
 A T C G C T A G A G T C C T G A A C T G A G T C C G T A C T A G A C G T A C T G C G T A G T A C G A C T A T C G A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T C T G A A T G C A C T G C G T A C A T G C T G A A T G C A C G T A G T C T G A C A G C T G A T C C G A T T G C A G T C A T A G C

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.59
Offset:3
Orientation:forward strand
Alignment:GRCRGCWGTGACTSCY--
---AGAAATGACTTCCCT
 A T C G C T A G A G T C C T G A A C T G A G T C C G T A C T A G A C G T A C T G C G T A G T A C G A C T A T C G A G T C A G T C A C G T A C G T
A C G T A C G T A C G T C T G A C T A G T G C A C T G A T C G A A G C T C A T G T C G A A G T C G A C T A C G T A G T C G A T C G A T C G A C T

Gfi1b/MA0483.1/Jaspar

Match Rank:5
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GRCRGCWGTGACTSCY
---TGCTGTGATTT--
 A T C G C T A G A G T C C T G A A C T G A G T C C G T A C T A G A C G T A C T G C G T A G T A C G A C T A T C G A G T C A G T C
A C G T A C G T A C G T C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T A C G T A C G T

EBNA1(EBV-virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer

Match Rank:6
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GRCRGCWGTGACTSCY----
GGYAGCAYDTGCTDCCCNNN
 A T C G C T A G A G T C C T G A A C T G A G T C C G T A C T A G A C G T A C T G C G T A G T A C G A C T A T C G A G T C A G T C A C G T A C G T A C G T A C G T
A C T G C T A G G A T C C G T A C T A G A G T C T G C A G A C T C G T A A C G T T C A G A G T C A C G T C T G A A G T C A G T C G A T C C G T A T C A G T A C G

Pax2/MA0067.1/Jaspar

Match Rank:7
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:GRCRGCWGTGACTSCY
-----NCGTGACN---
 A T C G C T A G A G T C C T G A A C T G A G T C C G T A C T A G A C G T A C T G C G T A G T A C G A C T A T C G A G T C A G T C
A C G T A C G T A C G T A C G T A C G T T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T A C G T A C G T A C G T

ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GRCRGCWGTGACTSCY
GTCWGCTGTYYCTCT-
 A T C G C T A G A G T C C T G A A C T G A G T C C G T A C T A G A C G T A C T G C G T A G T A C G A C T A T C G A G T C A G T C
C T A G A C G T A G T C C G T A A C T G A G T C G C A T A C T G G C A T A G T C G A C T G A T C G C A T A G T C A G C T A C G T

TGIF2/MA0797.1/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GRCRGCWGTGACTSCY
TGACAGCTGTCA-----
 A C G T A T C G C T A G A G T C C T G A A C T G A G T C C G T A C T A G A C G T A C T G C G T A G T A C G A C T A T C G A G T C A G T C
G C A T T A C G C T G A G A T C C T G A A T C G G T A C G A C T C T A G G A C T G A T C C G T A A C G T A C G T A C G T A C G T A C G T

PKNOX1/MA0782.1/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GRCRGCWGTGACTSCY
TGACACCTGTCA-----
 A C G T A T C G C T A G A G T C C T G A A C T G A G T C C G T A C T A G A C G T A C T G C G T A G T A C G A C T A T C G A G T C A G T C
G C A T A T C G C G T A A G T C T C G A A T G C G T A C G A C T C A T G G A C T A T G C C T G A A C G T A C G T A C G T A C G T A C G T