Information for 17-AATMCGGGATCTT (Motif 16)

C G T A C G T A A G C T G T C A A G T C C T A G A C T G C A T G C T G A A G C T A G T C C G A T C A G T
Reverse Opposite:
G C T A C G T A C T A G C T G A A G C T G A T C A G T C G A T C A C T G C A G T C T G A C G A T C G A T
p-value:1e-9
log p-value:-2.105e+01
Information Content per bp:1.729
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.23%
Number of Background Sequences with motif13.2
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets50.9 +/- 15.3bp
Average Position of motif in Background57.2 +/- 25.8bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:1
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:AATMCGGGATCTT
--ANCAGGATGT-
 C G T A C G T A A G C T G T C A A G T C C T A G A C T G C A T G C T G A A G C T A G T C C G A T C A G T
A C G T A C G T C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T A C G T

PB0162.1_Sfpi1_2/Jaspar

Match Rank:2
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--AATMCGGGATCTT
CAAATTCCGGAACC-
 A C G T A C G T C G T A C G T A A G C T G T C A A G T C C T A G A C T G C A T G C T G A A G C T A G T C C G A T C A G T
G T A C G C T A C T G A G C T A G C A T C G A T G T A C T G A C T C A G T C A G C G T A G C T A G T A C G T A C A C G T

PB0106.1_Arid5a_2/Jaspar

Match Rank:3
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----AATMCGGGATCTT
CATACAATACGAAATAA-
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A G C T G T C A A G T C C T A G A C T G C A T G C T G A A G C T A G T C C G A T C A G T
A T G C C T A G G A C T C G T A T G A C C G T A T G C A A C G T T G C A T A G C T A C G C T G A C T G A C G T A A G C T T C G A T C G A A C G T

RHOXF1/MA0719.1/Jaspar

Match Rank:4
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:AATMCGGGATCTT
-----NGGATTAN
 C G T A C G T A A G C T G T C A A G T C C T A G A C T G C A T G C T G A A G C T A G T C C G A T C A G T
A C G T A C G T A C G T A C G T A C G T C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T

PB0077.1_Spdef_1/Jaspar

Match Rank:5
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---AATMCGGGATCTT
GTACATCCGGATTTTT
 A C G T A C G T A C G T C G T A C G T A A G C T G T C A A G T C C T A G A C T G C A T G C T G A A G C T A G T C C G A T C A G T
T C A G G A C T C T G A A G T C C G T A C G A T T A G C G T A C A C T G A T C G C T G A G C A T G C A T G A C T A G C T A G C T

SPDEF/MA0686.1/Jaspar

Match Rank:6
Score:0.54
Offset:2
Orientation:forward strand
Alignment:AATMCGGGATCTT
--ACCCGGATGTA
 C G T A C G T A A G C T G T C A A G T C C T A G A C T G C A T G C T G A A G C T A G T C C G A T C A G T
A C G T A C G T C G T A T G A C T A G C G T A C T A C G C A T G C T G A G C A T T C A G G A C T C T G A

PH0165.1_Six6_1/Jaspar

Match Rank:7
Score:0.54
Offset:0
Orientation:forward strand
Alignment:AATMCGGGATCTT----
AATAGGGTATCAATTAT
 C G T A C G T A A G C T G T C A A G T C C T A G A C T G C A T G C T G A A G C T A G T C C G A T C A G T A C G T A C G T A C G T A C G T
C T G A G C T A C G A T T C G A T C A G A C T G T C A G A C G T C T G A A C G T G A T C C G T A G T C A C G A T G C A T G C T A A C G T

PB0024.1_Gcm1_1/Jaspar

Match Rank:8
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---AATMCGGGATCTT
NNNNATGCGGGTNNNN
 A C G T A C G T A C G T C G T A C G T A A G C T G T C A A G T C C T A G A C T G C A T G C T G A A G C T A G T C C G A T C A G T
G T C A C T G A G C A T A C T G T C G A G A C T T C A G A T G C C A T G A C T G A C T G A G C T C G T A A G T C A C T G C G T A

PB0051.1_Osr2_1/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-AATMCGGGATCTT--
ATGTACAGTAGCAAAG
 A C G T C G T A C G T A A G C T G T C A A G T C C T A G A C T G C A T G C T G A A G C T A G T C C G A T C A G T A C G T A C G T
G C A T C G A T T C A G G C A T G T C A G A T C C T G A A C T G C G A T C T G A A C T G A G T C G C T A G T C A G C T A C T A G

Six3/MA0631.1/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:forward strand
Alignment:AATMCGGGATCTT----
GATAGGGTATCACTAAT
 C G T A C G T A A G C T G T C A A G T C C T A G A C T G C A T G C T G A A G C T A G T C C G A T C A G T A C G T A C G T A C G T A C G T
C T A G C G T A C G A T C T G A T A C G A C T G T C A G A C G T C T G A A C G T G A T C T C G A G A T C G C A T C G A T G C T A A C G T