Information for 8-TGGCAAAGGTTGAGTC (Motif 13)

A C G T C T A G A C T G G T A C C G T A C G T A C G T A C T A G C T A G A C G T A C G T A C T G C G T A A C T G A C G T A G T C
Reverse Opposite:
C T A G C G T A A G T C C G A T A G T C C G T A C G T A A G T C G A T C A C G T A C G T A C G T A C T G T G A C A G T C C G T A
p-value:1e-11
log p-value:-2.646e+01
Information Content per bp:1.896
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.0 +/- 29.9bp
Average Position of motif in Background58.3 +/- 8.1bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0161.1_Rxra_2/Jaspar

Match Rank:1
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TGGCAAAGGTTGAGTC
TCGCGAAGGTTGTACT
 A C G T C T A G A C T G G T A C C G T A C G T A C G T A C T A G C T A G A C G T A C G T A C T G C G T A A C T G A C G T A G T C
C A G T T G A C T C A G G T A C T C A G G C T A G C T A C T A G A C T G A C G T A G C T T C A G A G C T C G T A G T A C C A G T

NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:2
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--TGGCAAAGGTTGAGTC--
NANTGGAAAAANTGAGTCAN
 A C G T A C G T A C G T C T A G A C T G G T A C C G T A C G T A C G T A C T A G C T A G A C G T A C G T A C T G C G T A A C T G A C G T A G T C A C G T A C G T
T A C G C T G A T C G A C G A T C T A G C T A G T C G A C T G A T C G A T C G A C G T A T C G A G C A T C A T G C G T A T A C G G C A T T G A C C G T A A G C T

FOS::JUN/MA0099.2/Jaspar

Match Rank:3
Score:0.53
Offset:10
Orientation:reverse strand
Alignment:TGGCAAAGGTTGAGTC-
----------TGAGTCA
 A C G T C T A G A C T G G T A C C G T A C G T A C G T A C T A G C T A G A C G T A C G T A C T G C G T A A C T G A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T A T C G G C T A A C T G A C G T G T A C C T G A

Nr2e3/MA0164.1/Jaspar

Match Rank:4
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:TGGCAAAGGTTGAGTC
-----AAGCTTG----
 A C G T C T A G A C T G G T A C C G T A C G T A C G T A C T A G C T A G A C G T A C G T A C T G C G T A A C T G A C G T A G T C
A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G A C G T A C G T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--TGGCAAAGGTTGAGTC
CTTGGCAA----------
 A C G T A C G T A C G T C T A G A C T G G T A C C G T A C G T A C G T A C T A G C T A G A C G T A C G T A C T G C G T A A C T G A C G T A G T C
A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

JUN(var.2)/MA0489.1/Jaspar

Match Rank:6
Score:0.52
Offset:4
Orientation:forward strand
Alignment:TGGCAAAGGTTGAGTC--
----AGGAGATGACTCAT
 A C G T C T A G A C T G G T A C C G T A C G T A C G T A C T A G C T A G A C G T A C G T A C T G C G T A A C T G A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T C T G A C T A G C T A G C T G A C T A G T C G A A C G T A C T G C G T A A T G C C G A T G T A C C G T A A C G T

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.51
Offset:8
Orientation:reverse strand
Alignment:TGGCAAAGGTTGAGTC--
--------GATGAGTCAT
 A C G T C T A G A C T G G T A C C G T A C G T A C G T A C T A G C T A G A C G T A C G T A C T G C G T A A C T G A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T G C A C G A T C A T G C G T A A T C G C G A T G T A C C G T A A G C T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:8
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--TGGCAAAGGTTGAGTC
TGGGGCAAAGGTCA----
 A C G T A C G T A C G T C T A G A C T G G T A C C G T A C G T A C G T A C T A G C T A G A C G T A C G T A C T G C G T A A C T G A C G T A G T C
C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T A C G T A C G T A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:9
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:TGGCAAAGGTTGAGTC
ANGNAAAGGTCA----
 A C G T C T A G A C T G G T A C C G T A C G T A C G T A C T A G C T A G A C G T A C G T A C T G C G T A A C T G A C G T A G T C
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:10
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--TGGCAAAGGTTGAGTC
NATGGAAAAN--------
 A C G T A C G T A C G T C T A G A C T G G T A C C G T A C G T A C G T A C T A G C T A G A C G T A C G T A C T G C G T A A C T G A C G T A G T C
G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T