Information for 17-GMGCSSWGCCGRG (Motif 22)

T C A G T G A C A T C G A G T C T A C G A T C G C G T A A T C G A T G C T G A C A C T G T C A G T A C G
Reverse Opposite:
A T G C A G T C A G T C A C T G A T C G T A G C G C A T T A G C A T G C A C T G T A G C A C T G A G T C
p-value:1e-4
log p-value:-1.014e+01
Information Content per bp:1.644
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.67%
Number of Background Sequences with motif462.1
Percentage of Background Sequences with motif0.96%
Average Position of motif in Targets52.7 +/- 20.0bp
Average Position of motif in Background48.9 +/- 30.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp1(Zf)/Promoter/Homer

Match Rank:1
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GMGCSSWGCCGRG
GGGGGCGGGGCC---
 A C G T A C G T T C A G T G A C A T C G A G T C T A C G A T C G C G T A A T C G A T G C T G A C A C T G T C A G T A C G
T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:2
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GMGCSSWGCCGRG
RGKGGGCGGAGC----
 A C G T A C G T A C G T T C A G T G A C A T C G A G T C T A C G A T C G C G T A A T C G A T G C T G A C A C T G T C A G T A C G
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:3
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GMGCSSWGCCGRG----
--DCHCAGCAGGRGGCC
 T C A G T G A C A T C G A G T C T A C G A T C G C G T A A T C G A T G C T G A C A C T G T C A G T A C G A C G T A C G T A C G T A C G T
A C G T A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:4
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GMGCSSWGCCGRG-
GGGGCTYGKCTGGGA
 A C G T T C A G T G A C A T C G A G T C T A C G A T C G C G T A A T C G A T G C T G A C A C T G T C A G T A C G A C G T
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A

PB0199.1_Zfp161_2/Jaspar

Match Rank:5
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GMGCSSWGCCGRG
GCCGCGCAGTGCGT--
 A C G T A C G T A C G T T C A G T G A C A T C G A G T C T A C G A T C G C G T A A T C G A T G C T G A C A C T G T C A G T A C G
C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T A C G T A C G T

POL003.1_GC-box/Jaspar

Match Rank:6
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GMGCSSWGCCGRG
AGGGGGCGGGGCTG--
 A C G T A C G T A C G T T C A G T G A C A T C G A G T C T A C G A T C G C G T A A T C G A T G C T G A C A C T G T C A G T A C G
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GMGCSSWGCCGRG--
---CACAGCAGGGGG
 T C A G T G A C A T C G A G T C T A C G A T C G C G T A A T C G A T G C T G A C A C T G T C A G T A C G A C G T A C G T
A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

PB0095.1_Zfp161_1/Jaspar

Match Rank:8
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----GMGCSSWGCCGRG
TGGCGCGCGCGCCTGA-
 A C G T A C G T A C G T A C G T T C A G T G A C A T C G A G T C T A C G A T C G C G T A A T C G A T G C T G A C A C T G T C A G T A C G
C A G T C T A G C T A G A T G C T C A G G A T C C T A G A G T C C T A G A G T C C T A G G A T C G A T C G A C T C T A G C G T A A C G T

ZIC3/MA0697.1/Jaspar

Match Rank:9
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:GMGCSSWGCCGRG----
--NCGCAGCGGGGGGTC
 T C A G T G A C A T C G A G T C T A C G A T C G C G T A A T C G A T G C T G A C A C T G T C A G T A C G A C G T A C G T A C G T A C G T
A C G T A C G T C A T G G T A C C T A G G A T C T G C A T C A G A G T C C T A G A C T G A C T G C A T G C A T G C A T G A G C T T G A C

POL011.1_XCPE1/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GMGCSSWGCCGRG
GGGCGGGACC---
 T C A G T G A C A T C G A G T C T A C G A T C G C G T A A T C G A T G C T G A C A C T G T C A G T A C G
A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C A C G T A C G T A C G T