Information for 5-CTTCYCAAGGGTTTTT (Motif 6)

A G T C A C G T A C G T A G T C A G C T G T A C G T C A C G T A C A T G A C T G A C T G C G A T A C G T A C G T G A C T C G A T
Reverse Opposite:
G C T A C T G A C G T A G T C A C G T A A G T C A G T C G T A C A C G T A C G T A C T G C T G A A C T G G T C A C G T A A C T G
p-value:1e-13
log p-value:-3.218e+01
Information Content per bp:1.785
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets65.8 +/- 9.2bp
Average Position of motif in Background53.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EBF1/MA0154.3/Jaspar

Match Rank:1
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CTTCYCAAGGGTTTTT
ANTCCCTNGGGAAT--
 A G T C A C G T A C G T A G T C A G C T G T A C G T C A C G T A C A T G A C T G A C T G C G A T A C G T A C G T G A C T C G A T
C T G A C A G T G A C T G T A C A G T C A G T C G C A T C G A T C T A G T C A G T A C G C T G A T G C A G A C T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:2
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CTTCYCAAGGGTTTTT
GCTTCC-----------
 A C G T A G T C A C G T A C G T A G T C A G C T G T A C G T C A C G T A C A T G A C T G A C T G C G A T A C G T A C G T G A C T C G A T
A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:3
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CTTCYCAAGGGTTTTT
--TCCCNNGGGACN--
 A G T C A C G T A C G T A G T C A G C T G T A C G T C A C G T A C A T G A C T G A C T G C G A T A C G T A C G T G A C T C G A T
A C G T A C G T G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A T A G C G A T C A C G T A C G T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:4
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:CTTCYCAAGGGTTTTT
NTGCCCANNGGTNA--
 A G T C A C G T A C G T A G T C A G C T G T A C G T C A C G T A C A T G A C T G A C T G C G A T A C G T A C G T G A C T C G A T
T G A C G C A T T C A G G T A C G A T C A G T C C G T A T A C G T C G A C T A G T C A G G A C T C A T G C T G A A C G T A C G T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:5
Score:0.51
Offset:7
Orientation:reverse strand
Alignment:CTTCYCAAGGGTTTTT
-------NGGGATTA-
 A G T C A C G T A C G T A G T C A G C T G T A C G T C A C G T A C A T G A C T G A C T G C G A T A C G T A C G T G A C T C G A T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A A C G T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.50
Offset:0
Orientation:forward strand
Alignment:CTTCYCAAGGGTTTTT
GTCCCCAGGGGA----
 A G T C A C G T A C G T A G T C A G C T G T A C G T C A C G T A C A T G A C T G A C T G C G A T A C G T A C G T G A C T C G A T
C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A A C G T A C G T A C G T A C G T

HLTF/MA0109.1/Jaspar

Match Rank:7
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:CTTCYCAAGGGTTTTT
---NNATAAGGNN---
 A G T C A C G T A C G T A G T C A G C T G T A C G T C A C G T A C A T G A C T G A C T G C G A T A C G T A C G T G A C T C G A T
A C G T A C G T A C G T C G T A A C G T G T C A G C A T C G T A C G T A A C T G A C T G C G A T G C A T A C G T A C G T A C G T

PB0135.1_Hoxa3_2/Jaspar

Match Rank:8
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:CTTCYCAAGGGTTTTT
--CCTTAATNGNTTTT
 A G T C A C G T A C G T A G T C A G C T G T A C G T C A C G T A C A T G A C T G A C T G C G A T A C G T A C G T G A C T C G A T
A C G T A C G T A G T C A T G C G A C T C G A T C G T A C G T A A C G T T C A G A C T G G C A T C G A T G A C T C A G T A G C T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:9
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-CTTCYCAAGGGTTTTT
HTTTCCCASG-------
 A C G T A G T C A C G T A C G T A G T C A G C T G T A C G T C A C G T A C A T G A C T G A C T G C G A T A C G T A C G T G A C T C G A T
G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.49
Offset:-4
Orientation:reverse strand
Alignment:----CTTCYCAAGGGTTTTT
KGCCCTTCCCCA--------
 A C G T A C G T A C G T A C G T A G T C A C G T A C G T A G T C A G C T G T A C G T C A C G T A C A T G A C T G A C T G C G A T A C G T A C G T G A C T C G A T
C A G T C A T G G A T C G A T C G A T C G A C T A G C T T G A C G A T C G A T C G A T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T