Information for 20-RTMTTKTWAGGATCTG (Motif 31)

C T A G A C G T G T C A A C G T A C G T A C T G A C G T C G A T C G T A C T A G A C T G C G T A A C G T A G T C A C G T A T C G
Reverse Opposite:
A T G C C G T A A C T G G T C A A C G T A G T C A G T C A C G T C G T A C G T A G T A C C G T A C G T A A C G T C G T A A G T C
p-value:1e-8
log p-value:-1.922e+01
Information Content per bp:1.885
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif4.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets39.8 +/- 16.8bp
Average Position of motif in Background70.2 +/- 3.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0181.1_Spdef_2/Jaspar

Match Rank:1
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:RTMTTKTWAGGATCTG---
---CTACTAGGATGTNNTN
 C T A G A C G T G T C A A C G T A C G T A C T G A C G T C G A T C G T A C T A G A C T G C G T A A C G T A G T C A C G T A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A G T C G C A T C G T A T G A C C G A T T C G A T A C G C A T G C G T A G A C T C T A G G A C T C G A T T C G A G C A T G A T C

PB0123.1_Foxl1_2/Jaspar

Match Rank:2
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-RTMTTKTWAGGATCTG
NNTTTTGTTTTGATNT-
 A C G T C T A G A C G T G T C A A C G T A C G T A C T G A C G T C G A T C G T A C T A G A C T G C G T A A C G T A G T C A C G T A T C G
C A G T C A T G G A C T C A G T G C A T G C A T T C A G A C G T C A G T C G A T C A G T C T A G G C T A G C A T G C T A C G A T A C G T

Hoxa11/MA0911.1/Jaspar

Match Rank:3
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:RTMTTKTWAGGATCTG
--ANTTTTACGACC--
 C T A G A C G T G T C A A C G T A C G T A C T G A C G T C G A T C G T A C T A G A C T G C G T A A C G T A G T C A C G T A T C G
A C G T A C G T G C T A C G T A C G A T C G A T G C A T G C A T G C T A G A T C C T A G T C G A A G T C G A T C A C G T A C G T

HOXC11/MA0651.1/Jaspar

Match Rank:4
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:RTMTTKTWAGGATCTG
---NTTTTACGACC--
 C T A G A C G T G T C A A C G T A C G T A C T G A C G T C G A T C G T A C T A G A C T G C G T A A C G T A G T C A C G T A T C G
A C G T A C G T A C G T C G T A C G A T C A G T C G A T G C A T C G T A A G T C C T A G C T G A A G T C G A T C A C G T A C G T

HOXD11/MA0908.1/Jaspar

Match Rank:5
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:RTMTTKTWAGGATCTG
---NTTTTACGAC---
 C T A G A C G T G T C A A C G T A C G T A C T G A C G T C G A T C G T A C T A G A C T G C G T A A C G T A G T C A C G T A T C G
A C G T A C G T A C G T C G A T C G A T C G A T C G A T C G A T C G T A A G T C C T A G C G T A A G T C A C G T A C G T A C G T

HOXD12/MA0873.1/Jaspar

Match Rank:6
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:RTMTTKTWAGGATCTG
---NTTTTACGACT--
 C T A G A C G T G T C A A C G T A C G T A C T G A C G T C G A T C G T A C T A G A C T G C G T A A C G T A G T C A C G T A T C G
A C G T A C G T A C G T C A G T C G A T G C A T A G C T G C A T C T G A A G T C A T C G T C G A A G T C A G C T A C G T A C G T

HOXC12/MA0906.1/Jaspar

Match Rank:7
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:RTMTTKTWAGGATCTG
---NTTTTACGACC--
 C T A G A C G T G T C A A C G T A C G T A C T G A C G T C G A T C G T A C T A G A C T G C G T A A C G T A G T C A C G T A T C G
A C G T A C G T A C G T C G A T C A G T C G A T G C A T C G A T T C G A A G T C C A T G C T G A A G T C G A T C A C G T A C G T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:8
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:RTMTTKTWAGGATCTG--
-------AAGGATATNTN
 C T A G A C G T G T C A A C G T A C G T A C T G A C G T C G A T C G T A C T A G A C T G C G T A A C G T A G T C A C G T A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T

HOXC10/MA0905.1/Jaspar

Match Rank:9
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:RTMTTKTWAGGATCTG
---NTTTTACGAC---
 C T A G A C G T G T C A A C G T A C G T A C T G A C G T C G A T C G T A C T A G A C T G C G T A A C G T A G T C A C G T A T C G
A C G T A C G T A C G T C G T A C G A T G C A T G C A T C G A T C G T A G A T C C A T G C T G A A G T C A C G T A C G T A C G T

MEF2C/MA0497.1/Jaspar

Match Rank:10
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--RTMTTKTWAGGATCTG
TTCTATTTTTAGNNN---
 A C G T A C G T C T A G A C G T G T C A A C G T A C G T A C T G A C G T C G A T C G T A C T A G A C T G C G T A A C G T A G T C A C G T A T C G
C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T A C G T A C G T A C G T