Information for 19-TCTGATTCATGGTCTG (Motif 29)

A G C T G T A C A C G T A T C G C G T A A C G T A C G T A G T C C G T A A G C T C T A G A C T G A G C T A G T C A C G T A C T G
Reverse Opposite:
A G T C C G T A A C T G C T G A A G T C A G T C C T G A A C G T A C T G C G T A C G T A A C G T A T G C C G T A A C T G C T G A
p-value:1e-8
log p-value:-2.024e+01
Information Content per bp:1.926
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets65.4 +/- 15.9bp
Average Position of motif in Background22.9 +/- 2.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer

Match Rank:1
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:TCTGATTCATGGTCTG
--TGATTTATGGCC--
 A G C T G T A C A C G T A T C G C G T A A C G T A C G T A G T C C G T A A G C T C T A G A C T G A G C T A G T C A C G T A C T G
A C G T A C G T C G A T C T A G G C T A C G A T C A G T A C G T G T C A A G C T C A T G T C A G A G T C A G T C A C G T A C G T

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:2
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:TCTGATTCATGGTCTG
--TGATTTATGGCC--
 A G C T G T A C A C G T A T C G C G T A A C G T A C G T A G T C C G T A A G C T C T A G A C T G A G C T A G T C A C G T A C T G
A C G T A C G T C G A T C T A G C G T A C G A T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C A C G T A C G T

Hoxa9/MA0594.1/Jaspar

Match Rank:3
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:TCTGATTCATGGTCTG
--TGATTTATGGC---
 A G C T G T A C A C G T A T C G C G T A A C G T A C G T A G T C C G T A A G C T C T A G A C T G A G C T A G T C A C G T A C T G
A C G T A C G T C G A T C T A G G C T A A C G T C G A T A C G T C G T A A G C T C A T G C T A G A T G C A C G T A C G T A C G T

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:4
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:TCTGATTCATGGTCTG
--TGATTGATGA----
 A G C T G T A C A C G T A T C G C G T A A C G T A C G T A G T C C G T A A G C T C T A G A C T G A G C T A G T C A C G T A C T G
A C G T A C G T C G A T T C A G G T C A A G C T C G A T C T A G C G T A A C G T C A T G C T G A A C G T A C G T A C G T A C G T

Hoxc9/MA0485.1/Jaspar

Match Rank:5
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:TCTGATTCATGGTCTG
-NTGATTTATGGCC--
 A G C T G T A C A C G T A T C G C G T A A C G T A C G T A G T C C G T A A G C T C T A G A C T G A G C T A G T C A C G T A C T G
A C G T T C A G C G A T C T A G C G T A A C G T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C A C G T A C G T

FOS/MA0476.1/Jaspar

Match Rank:6
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TCTGATTCATGGTCTG
TGTGACTCATT-----
 A G C T G T A C A C G T A T C G C G T A A C G T A C G T A G T C C G T A A G C T C T A G A C T G A G C T A G T C A C G T A C T G
C A G T T A C G A C G T A C T G C G T A A T G C A C G T A G T C C G T A A G C T A G C T A C G T A C G T A C G T A C G T A C G T

Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer

Match Rank:7
Score:0.64
Offset:2
Orientation:forward strand
Alignment:TCTGATTCATGGTCTG
--TGATTRATGGCY--
 A G C T G T A C A C G T A T C G C G T A A C G T A C G T A G T C C G T A A G C T C T A G A C T G A G C T A G T C A C G T A C T G
A C G T A C G T C G A T C T A G T C G A A G C T C G A T C T G A C G T A A G C T A C T G C T A G A T G C G A T C A C G T A C G T

JUND/MA0491.1/Jaspar

Match Rank:8
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TCTGATTCATGGTCTG
GGTGACTCATC-----
 A G C T G T A C A C G T A T C G C G T A A C G T A C G T A G T C C G T A A G C T C T A G A C T G A G C T A G T C A C G T A C T G
C T A G T C A G A C G T A C T G C G T A A T G C A C G T G T A C C G T A A G C T T A G C A C G T A C G T A C G T A C G T A C G T

BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer

Match Rank:9
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TCTGATTCATGGTCTG
DATGASTCAT------
 A G C T G T A C A C G T A T C G C G T A A C G T A C G T A G T C C G T A A G C T C T A G A C T G A G C T A G T C A C G T A C T G
C A G T T G C A A C G T A C T G C G T A A T C G C G A T T G A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

JUN(var.2)/MA0489.1/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TCTGATTCATGGTCTG
-ATGAGTCATNTNNT-
 A G C T G T A C A C G T A T C G C G T A A C G T A C G T A G T C C G T A A G C T C T A G A C T G A G C T A G T C A C G T A C T G
A C G T T G C A A C G T A C T G C G T A T A C G C G A T A G T C C G T A A G C T G A T C G A C T G A T C G A T C G A C T A C G T