Information for 10-GGTTTCTGCCAGTCAG (Motif 13)

A C T G C T A G C G A T A G C T A C G T A G T C A G C T A C T G A T G C A G T C C G T A A C T G A G C T G T A C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G T C G A G T A C C G A T A C T G A T C G A G T C C T G A A C T G C G T A C T G A C G T A G A T C A G T C
p-value:1e-12
log p-value:-2.803e+01
Information Content per bp:1.825
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.0 +/- 16.3bp
Average Position of motif in Background51.9 +/- 1.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:1
Score:0.58
Offset:4
Orientation:forward strand
Alignment:GGTTTCTGCCAGTCAG
----SCTGTCAVTCAV
 A C T G C T A G C G A T A G C T A C G T A G T C A G C T A C T G A T G C A G T C C G T A A C T G A G C T G T A C C G T A A C T G
A C G T A C G T A C G T A C G T T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GGTTTCTGCCAGTCAG
----NCTGTCAATCAN
 A C T G C T A G C G A T A G C T A C G T A G T C A G C T A C T G A T G C A G T C C G T A A C T G A G C T G T A C C G T A A C T G
A C G T A C G T A C G T A C G T T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GGTTTCTGCCAGTCAG
TGGTTTCAGT-------
 A C G T A C T G C T A G C G A T A G C T A C G T A G T C A G C T A C T G A T G C A G T C C G T A A C T G A G C T G T A C C G T A A C T G
G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-GGTTTCTGCCAGTCAG
GGGTTACTANAGGTCA-
 A C G T A C T G C T A G C G A T A G C T A C G T A G T C A G C T A C T G A T G C A G T C C G T A A C T G A G C T G T A C C G T A A C T G
C T A G C A T G C A T G A G C T G A C T C G T A G A T C A G C T G T C A A T G C T C G A C T A G C A T G A C G T A G T C C T G A A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:5
Score:0.51
Offset:2
Orientation:forward strand
Alignment:GGTTTCTGCCAGTCAG
--GGTCTGGCAT----
 A C T G C T A G C G A T A G C T A C G T A G T C A G C T A C T G A T G C A G T C C G T A A C T G A G C T G T A C C G T A A C T G
A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T A C G T A C G T A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:6
Score:0.51
Offset:3
Orientation:forward strand
Alignment:GGTTTCTGCCAGTCAG
---GSCTGTCACTCA-
 A C T G C T A G C G A T A G C T A C G T A G T C A G C T A C T G A T G C A G T C C G T A A C T G A G C T G T A C C G T A A C T G
A C G T A C G T A C G T C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A A C G T

PB0036.1_Irf6_1/Jaspar

Match Rank:7
Score:0.51
Offset:-5
Orientation:reverse strand
Alignment:-----GGTTTCTGCCAGTCAG
NNNTTGGTTTCGNTNNN----
 A C G T A C G T A C G T A C G T A C G T A C T G C T A G C G A T A G C T A C G T A G T C A G C T A C T G A T G C A G T C C G T A A C T G A G C T G T A C C G T A A C T G
G C T A G T A C G C A T A C G T A G C T C T A G A C T G A C G T G C A T A C G T A G T C C T A G C T G A G A C T G A T C G C T A C A T G A C G T A C G T A C G T A C G T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:8
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:GGTTTCTGCCAGTCAG
--TTCCCGCCWG----
 A C T G C T A G C G A T A G C T A C G T A G T C A G C T A C T G A T G C A G T C C G T A A C T G A G C T G T A C C G T A A C T G
A C G T A C G T A G C T A C G T A T G C A T G C A G T C A C T G A G T C A T G C G C T A A T C G A C G T A C G T A C G T A C G T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:9
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:GGTTTCTGCCAGTCAG--
--NNNNTGCCAGTGATTG
 A C T G C T A G C G A T A G C T A C G T A G T C A G C T A C T G A T G C A G T C C G T A A C T G A G C T G T A C C G T A A C T G A C G T A C G T
A C G T A C G T G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:10
Score:0.50
Offset:5
Orientation:forward strand
Alignment:GGTTTCTGCCAGTCAG---
-----CTGGCAGNCTGCCA
 A C T G C T A G C G A T A G C T A C G T A G T C A G C T A C T G A T G C A G T C C G T A A C T G A G C T G T A C C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A