Motif Name	Consensus	P-value	Log P-value	q-value (Benjamini)	# of Target Sequences with Motif(of 656)	% of Target Sequences with Motif	# of Background Sequences with Motif(of 465)	% of Background Sequences with Motif
Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer	SAGATAAGRV	1e-83	-1.921e+02	0.0000	137.0	20.88%	11.3	2.43%
Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer	BBCTTATCTS	1e-80	-1.863e+02	0.0000	152.0	23.17%	15.1	3.26%
Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer	NBWGATAAGR	1e-74	-1.707e+02	0.0000	199.0	30.34%	31.9	6.86%
Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer	YCTTATCTBN	1e-73	-1.692e+02	0.0000	186.0	28.35%	27.7	5.97%
GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NAGATWNBNATCTNN	1e-64	-1.491e+02	0.0000	54.0	8.23%	0.0	0.00%
GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATAASR	1e-63	-1.451e+02	0.0000	266.0	40.55%	65.0	13.99%
GATA3(Zf),DR8/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATSTNDNNDSAGATAASN	1e-53	-1.235e+02	0.0000	47.0	7.16%	0.9	0.19%
GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATGKDGAGATAAG	1e-34	-7.898e+01	0.0000	34.0	5.18%	0.0	0.00%
BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer	DATGASTCAT	1e-21	-4.916e+01	0.0000	56.0	8.54%	8.4	1.81%
AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	VTGACTCATC	1e-20	-4.832e+01	0.0000	62.0	9.45%	10.9	2.34%
Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer	NNATGASTCATH	1e-19	-4.480e+01	0.0000	50.0	7.62%	7.6	1.65%
JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer	RATGASTCAT	1e-17	-3.942e+01	0.0000	50.0	7.62%	8.4	1.81%
Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer	GGATGACTCATC	1e-16	-3.818e+01	0.0000	46.0	7.01%	7.2	1.55%
Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer	DATGASTCATHN	1e-12	-2.789e+01	0.0000	53.0	8.08%	12.3	2.65%
Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer	NYTAATCCYB	1e-10	-2.514e+01	0.0000	58.0	8.84%	16.0	3.44%
Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer	NATGASTCABNN	1e-10	-2.468e+01	0.0000	37.0	5.64%	7.2	1.55%
GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NNNNNBAGATAWYATCTVHN	1e-9	-2.274e+01	0.0000	41.0	6.25%	9.3	2.01%
Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer	YCATYAATCA	1e-9	-2.124e+01	0.0000	61.0	9.30%	18.4	3.96%
MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer	TGCTGACTCA	1e-8	-1.938e+01	0.0000	33.0	5.03%	7.4	1.60%
Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	GATGASTCATCN	1e-8	-1.903e+01	0.0000	30.0	4.57%	6.6	1.43%
Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer	TGCTGAGTCA	1e-7	-1.721e+01	0.0000	12.0	1.83%	0.5	0.11%
Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer	SCTGTCAMTCAN	1e-6	-1.505e+01	0.0000	11.0	1.68%	0.6	0.14%
Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer	WATGCAAATGAG	1e-6	-1.402e+01	0.0000	26.0	3.96%	6.4	1.39%
Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer	NAACAGCTGG	1e-5	-1.354e+01	0.0000	23.0	3.51%	5.9	1.27%
ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer	NGNTCTAGAACCNGV	1e-5	-1.335e+01	0.0000	14.0	2.13%	2.7	0.57%
CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer	CCATATATGGNM	1e-5	-1.297e+01	0.0000	10.0	1.52%	1.6	0.34%
NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer	ATTTTCCATT	1e-5	-1.273e+01	0.0000	45.0	6.86%	15.2	3.28%
Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer	ADBTAATTAR	1e-5	-1.238e+01	0.0001	95.0	14.48%	42.1	9.07%
Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer	MTGATGCAAT	1e-4	-1.099e+01	0.0002	9.0	1.37%	0.5	0.10%
AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer	ATGCCCTGAGGC	1e-4	-1.063e+01	0.0003	18.0	2.74%	4.7	1.01%
NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer	WGGGGATTTCCC	1e-4	-1.063e+01	0.0003	18.0	2.74%	5.0	1.07%
GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer	RGGATTAR	1e-4	-9.717e+00	0.0007	95.0	14.48%	45.3	9.76%
Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer	CCTGCTGAGH	1e-4	-9.330e+00	0.0010	24.0	3.66%	7.2	1.54%
Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	ATTGCATCAT	1e-3	-9.109e+00	0.0011	8.0	1.22%	0.3	0.05%
MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer	GCTGASTCAGCA	1e-3	-9.109e+00	0.0011	8.0	1.22%	1.6	0.34%
Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer	SCCTAGCAACAG	1e-3	-9.109e+00	0.0011	8.0	1.22%	1.5	0.33%
Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer	TATGCWAATBAV	1e-3	-8.932e+00	0.0013	19.0	2.90%	5.5	1.19%
Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer	AAACMATTAN	1e-3	-8.609e+00	0.0017	21.0	3.20%	6.2	1.33%
MafB(bZIP)/BMM-Mafb-ChIP-Seq(GSE75722)/Homer	WNTGCTGASTCAGCANWTTY	1e-3	-8.292e+00	0.0023	16.0	2.44%	4.0	0.86%
PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	AGAGGAAGTG	1e-3	-8.292e+00	0.0023	16.0	2.44%	4.6	0.99%
RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer	SAAACCACAG	1e-3	-8.178e+00	0.0025	27.0	4.12%	9.9	2.14%
Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer	NAHCAGCTGD	1e-3	-8.125e+00	0.0026	33.0	5.03%	12.2	2.64%
CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer	GCTAATCC	1e-3	-8.100e+00	0.0026	140.0	21.34%	75.5	16.25%
Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer	GATGACGTCA	1e-3	-7.900e+00	0.0030	18.0	2.74%	5.8	1.24%
Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer	DCYAAAAATAGM	1e-3	-7.900e+00	0.0030	18.0	2.74%	5.7	1.22%
Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer	RRSCACTYAA	1e-3	-7.746e+00	0.0034	67.0	10.21%	31.8	6.84%
HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer	TTCTAGAABNTTCTA	1e-3	-7.715e+00	0.0034	13.0	1.98%	3.2	0.69%
Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer	SCTGTCAVTCAV	1e-3	-7.715e+00	0.0034	13.0	1.98%	3.4	0.73%
ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer	AACATCTGGA	1e-3	-7.715e+00	0.0034	13.0	1.98%	3.5	0.74%
Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer	GWAAYHTGAKMC	1e-3	-7.657e+00	0.0034	51.0	7.77%	22.5	4.83%
Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer	MAATCACTGC	1e-3	-7.512e+00	0.0039	36.0	5.49%	14.6	3.15%
RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer	NWAACCACADNN	1e-3	-7.409e+00	0.0042	32.0	4.88%	12.8	2.76%
DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer	TWGHWACAWTGTWDC	1e-3	-7.346e+00	0.0043	7.0	1.07%	0.2	0.05%
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer	AAYTAGGTCA	1e-3	-7.346e+00	0.0043	7.0	1.07%	0.3	0.06%
SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer	AAAGRGGAAGTG	1e-3	-7.346e+00	0.0043	7.0	1.07%	0.5	0.12%
Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer	NGRTGACGTCAY	1e-3	-7.209e+00	0.0048	15.0	2.29%	5.0	1.07%
Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer	AAGGTGTKAA	1e-2	-6.720e+00	0.0077	58.0	8.84%	27.5	5.91%
Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer	VNRVCAGCTGGY	1e-2	-6.661e+00	0.0080	21.0	3.20%	7.4	1.59%
ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer	WDNCTGGGCA	1e-2	-6.433e+00	0.0099	38.0	5.79%	16.9	3.64%
SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer	AVCAGCTG	1e-2	-6.425e+00	0.0099	169.0	25.76%	97.4	20.96%
Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer	NRRTGACGTCAT	1e-2	-6.187e+00	0.0119	14.0	2.13%	4.7	1.01%
FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer	NYYTGTTTACHN	1e-2	-6.187e+00	0.0119	14.0	2.13%	4.2	0.91%
GATA:SCL(Zf,bHLH)/Ter119-SCL-ChIP-Seq(GSE18720)/Homer	CRGCTGBNGNSNNSAGATAA	1e-2	-6.187e+00	0.0119	14.0	2.13%	5.0	1.07%
Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer	BTBRAGTGSN	1e-2	-5.898e+00	0.0156	63.0	9.60%	31.1	6.70%
DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer	YDGHTACAWTGTADC	1e-2	-5.710e+00	0.0180	6.0	0.91%	0.2	0.05%
HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer	GYCATCMATCAT	1e-2	-5.710e+00	0.0180	6.0	0.91%	0.0	0.00%
Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer	YTAATTRAWWCCAGATGT	1e-2	-5.710e+00	0.0180	6.0	0.91%	0.0	0.00%
Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer	ATTAACACCT	1e-2	-5.458e+00	0.0228	96.0	14.63%	52.4	11.28%
Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer	AGGTGTCA	1e-2	-5.439e+00	0.0229	107.0	16.31%	59.5	12.81%
EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer	AVCAGGAAGT	1e-2	-5.433e+00	0.0229	38.0	5.79%	17.3	3.73%
NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer	ACCATCTGTT	1e-2	-5.237e+00	0.0272	48.0	7.32%	23.5	5.05%
SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer	ASWTCCTGBT	1e-2	-4.961e+00	0.0354	30.0	4.57%	13.5	2.90%
ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer	ACAGGAAGTG	1e-2	-4.850e+00	0.0390	28.0	4.27%	12.6	2.71%
NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer	YTGCCAAG	1e-2	-4.779e+00	0.0414	52.0	7.93%	26.5	5.70%
EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer	NWGGGTGTGGCY	1e-2	-4.775e+00	0.0414	8.0	1.22%	2.8	0.60%
Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer	GCTATTTTTAGC	1e-2	-4.775e+00	0.0414	8.0	1.22%	2.7	0.57%
Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer	CCATTGTATGCAAAT	1e-2	-4.775e+00	0.0414	8.0	1.22%	2.7	0.57%
RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer	GCTGTGGTTW	1e-2	-4.643e+00	0.0449	24.0	3.66%	10.9	2.35%
Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer	TGTCANYT	1e-2	-4.620e+00	0.0454	129.0	19.66%	75.8	16.32%
Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer	YTAATYNRATTA	1e-1	-4.549e+00	0.0482	22.0	3.35%	9.8	2.12%
Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer	MACAGGAAGT	1e-1	-4.343e+00	0.0584	12.0	1.83%	4.6	0.99%
Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer	TGACANARRCCAGRC	1e-1	-4.340e+00	0.0584	16.0	2.44%	6.8	1.45%
Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer	NNYTAATTAR	1e-1	-4.262e+00	0.0618	54.0	8.23%	28.6	6.16%
Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer	RGCCATTAAC	1e-1	-4.249e+00	0.0619	195.0	29.73%	120.6	25.96%
Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer	AGGTGTGAAM	1e-1	-4.240e+00	0.0619	39.0	5.95%	19.6	4.22%
ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer	AAGGKGRCGCAGGCA	1e-1	-4.220e+00	0.0622	5.0	0.76%	1.9	0.42%
THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer	TRAGGTCA	1e-1	-4.136e+00	0.0669	118.0	17.99%	69.4	14.93%
Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer	GGCCATAAATCA	1e-1	-3.833e+00	0.0895	19.0	2.90%	8.7	1.86%
E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer	GGCGGGAAAH	1e-1	-3.678e+00	0.1022	7.0	1.07%	2.1	0.45%
THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer	GGTCANYTGAGGWCA	1e-1	-3.678e+00	0.1022	7.0	1.07%	2.4	0.51%
Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer	KTGACCTTGA	1e-1	-3.571e+00	0.1125	13.0	1.98%	5.1	1.09%
RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer	AAACCACARM	1e-1	-3.570e+00	0.1125	44.0	6.71%	23.5	5.06%
SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer	CAAGGHCANV	1e-1	-3.541e+00	0.1125	9.0	1.37%	3.3	0.70%
ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer	ATTTCCCAGVAKSCY	1e-1	-3.541e+00	0.1125	9.0	1.37%	3.7	0.79%
HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer	GGCCATAAATCA	1e-1	-3.275e+00	0.1450	25.0	3.81%	12.0	2.59%
ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer	AVCCGGAAGT	1e-1	-3.124e+00	0.1667	16.0	2.44%	7.1	1.52%
BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer	NHAACBGYYV	1e-1	-3.017e+00	0.1837	52.0	7.93%	29.6	6.37%
BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer	CNNBRGCGCCCCCTGSTGGC	1e-1	-2.899e+00	0.1947	4.0	0.61%	2.0	0.43%
Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer	TGATTRATGGCY	1e-1	-2.899e+00	0.1947	4.0	0.61%	0.0	0.00%
PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GTCACGCTCSCTGM	1e-1	-2.899e+00	0.1947	4.0	0.61%	0.9	0.19%
TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer	ACWTCAAAGG	1e-1	-2.899e+00	0.1947	4.0	0.61%	0.0	0.00%
Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer	VCAKCTGGNNNCCAGMTGBN	1e-1	-2.899e+00	0.1947	4.0	0.61%	1.6	0.34%
ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer	GTCWGCTGTYYCTCT	1e-1	-2.899e+00	0.1947	4.0	0.61%	0.0	0.00%
ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer	TGGGGAAGGGCM	1e-1	-2.854e+00	0.2017	19.0	2.90%	9.6	2.06%
Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer	NTAATBNAATTA	1e-1	-2.832e+00	0.2041	29.0	4.42%	15.5	3.33%
TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer	YCWGGAATGY	1e-1	-2.791e+00	0.2106	37.0	5.64%	20.0	4.32%
ETS(ETS)/Promoter/Homer	AACCGGAAGT	1e-1	-2.790e+00	0.2106	10.0	1.52%	5.0	1.07%
Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer	GGCCYCCTGCTGDGH	1e-1	-2.715e+00	0.2210	8.0	1.22%	3.5	0.75%
ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer	GRTGMTRGAGCC	1e-1	-2.715e+00	0.2210	8.0	1.22%	3.5	0.74%
FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer	AGGTCANTGACCTB	1e-1	-2.701e+00	0.2210	6.0	0.91%	2.5	0.54%
KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer	GGGGGTGTGTCC	1e-1	-2.701e+00	0.2210	6.0	0.91%	2.1	0.44%
AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer	TGGCAGTTGG	1e-1	-2.537e+00	0.2570	41.0	6.25%	23.4	5.04%
Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer	NNNCTTTCCAGGAAA	1e-1	-2.495e+00	0.2658	44.0	6.71%	25.4	5.48%
Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer	CACAGCAGGGGG	1e-1	-2.425e+00	0.2826	13.0	1.98%	6.7	1.44%
CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer	NGYCATAAAWCH	1e0	-2.236e+00	0.3385	40.0	6.10%	23.0	4.95%
Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer	BAACAGCTGT	1e0	-2.224e+00	0.3395	16.0	2.44%	8.3	1.79%
Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer	GCCACACCCA	1e0	-2.134e+00	0.3651	9.0	1.37%	4.1	0.89%
Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer	ATGCATAATTCA	1e0	-2.134e+00	0.3651	9.0	1.37%	4.5	0.98%
Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer	CTAATKGV	1e0	-2.108e+00	0.3714	67.0	10.21%	42.0	9.04%
AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer	SCCTSAGGSCAW	1e0	-2.098e+00	0.3723	19.0	2.90%	10.8	2.33%
TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer	CCWGGAATGY	1e0	-2.012e+00	0.4021	22.0	3.35%	12.8	2.77%
KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer	MKGGGYGTGGCC	1e0	-1.944e+00	0.4271	17.0	2.59%	9.0	1.94%
c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	ATGACGTCATCY	1e0	-1.907e+00	0.4394	12.0	1.83%	6.3	1.36%
PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer	VAGRACAKNCTGTBC	1e0	-1.897e+00	0.4402	57.0	8.69%	35.5	7.65%
Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer	NNVVCAGCTGBN	1e0	-1.874e+00	0.4469	31.0	4.73%	18.2	3.93%
ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer	ANCAGGAAGT	1e0	-1.864e+00	0.4469	20.0	3.05%	11.2	2.42%
Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer	SSCMATWAAA	1e0	-1.864e+00	0.4469	20.0	3.05%	11.7	2.53%
MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer	RTCATGTGAC	1e0	-1.864e+00	0.4469	20.0	3.05%	11.5	2.48%
Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer	WWATRTAAACAN	1e0	-1.830e+00	0.4525	37.0	5.64%	22.0	4.74%
ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer	AACCGGAAGT	1e0	-1.806e+00	0.4602	43.0	6.55%	27.0	5.80%
ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	RGRACASNSTGTYCYB	1e0	-1.774e+00	0.4602	3.0	0.46%	1.5	0.33%
IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer	CTTTCANTATGACTV	1e0	-1.774e+00	0.4602	3.0	0.46%	0.0	0.00%
CRE(bZIP)/Promoter/Homer	CSGTGACGTCAC	1e0	-1.774e+00	0.4602	3.0	0.46%	1.8	0.39%
CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer	AYAGTGCCMYCTRGTGGCCA	1e0	-1.774e+00	0.4602	3.0	0.46%	0.8	0.18%
E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer	CWGGCGGGAA	1e0	-1.774e+00	0.4602	3.0	0.46%	0.5	0.11%
ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer	AGGAARCAGCTG	1e0	-1.774e+00	0.4602	3.0	0.46%	1.2	0.27%
GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer	NRGVACABNVTGTYCY	1e0	-1.774e+00	0.4602	3.0	0.46%	1.0	0.22%
PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GCAGCCAAGCRTGACH	1e0	-1.774e+00	0.4602	3.0	0.46%	1.8	0.39%
Pax7(Paired,Homeobox),longest/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	NTAATTDGCYAATTANNWWD	1e0	-1.774e+00	0.4602	3.0	0.46%	0.7	0.15%
Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCAATTA	1e0	-1.774e+00	0.4602	3.0	0.46%	0.0	0.00%
PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer	GSCTGTCACTCA	1e0	-1.774e+00	0.4602	3.0	0.46%	0.0	0.00%
Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer	GTRGGTCASTGGGTCA	1e0	-1.774e+00	0.4602	3.0	0.46%	0.2	0.04%
Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	KGTTGCCATGGCAA	1e0	-1.774e+00	0.4602	3.0	0.46%	0.7	0.15%
TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer	GAGGTCAAAGGTCA	1e0	-1.774e+00	0.4602	3.0	0.46%	0.2	0.05%
X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	GGTTGCCATGGCAA	1e0	-1.774e+00	0.4602	3.0	0.46%	0.3	0.06%
EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer	GTCCCCWGGGGA	1e0	-1.664e+00	0.4722	21.0	3.20%	12.4	2.67%
Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer	YTGWCADY	1e0	-1.576e+00	0.5123	104.0	15.85%	68.6	14.77%
Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer	CCWTTGTYYB	1e0	-1.574e+00	0.5123	48.0	7.32%	30.7	6.60%
MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer	RRCAGCTGYTSY	1e0	-1.558e+00	0.5123	16.0	2.44%	9.8	2.12%
NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer	GCCATCTGTT	1e0	-1.558e+00	0.5123	16.0	2.44%	9.4	2.02%
MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer	AACAGCTG	1e0	-1.492e+00	0.5421	22.0	3.35%	13.1	2.83%
Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer	TWGTCTGV	1e0	-1.459e+00	0.5566	74.0	11.28%	48.1	10.36%
Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer	GYMATAAAAH	1e0	-1.458e+00	0.5566	37.0	5.64%	24.0	5.16%
Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer	HACTTCCGGY	1e0	-1.399e+00	0.5795	14.0	2.13%	8.8	1.89%
MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer	HWWGTCAGCAWWTTT	1e0	-1.399e+00	0.5795	14.0	2.13%	8.8	1.90%
GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer	AAACYKGTTWDACMRGTTTB	1e0	-1.373e+00	0.5871	6.0	0.91%	3.8	0.81%
OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAACAATG	1e0	-1.373e+00	0.5871	6.0	0.91%	3.2	0.69%
Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer	RCCATMTGTT	1e0	-1.325e+00	0.6121	60.0	9.15%	39.1	8.41%
E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer	GGCGGGAARN	1e0	-1.276e+00	0.6354	9.0	1.37%	5.5	1.18%
n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer	VRCCACGTGG	1e0	-1.276e+00	0.6354	9.0	1.37%	5.4	1.17%
GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer	VAGRACAKWCTGTYC	1e0	-1.158e+00	0.7058	4.0	0.61%	2.6	0.55%
HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer	BSTTCTRGAABVTTCYAGAA	1e0	-1.158e+00	0.7058	4.0	0.61%	2.2	0.47%
Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer	CCATTGTTYB	1e0	-1.077e+00	0.7608	19.0	2.90%	12.9	2.78%
Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer	TBGCACGCAA	1e0	-1.066e+00	0.7643	10.0	1.52%	6.4	1.37%
Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer	TAATCCCN	1e0	-1.045e+00	0.7761	200.0	30.49%	138.5	29.81%
Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer	GCTATTTTTGGM	1e0	-9.629e-01	0.8371	36.0	5.49%	24.2	5.20%
Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer	NRYTTCCGGH	1e0	-9.446e-01	0.8475	33.0	5.03%	22.1	4.76%
Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer	CVGTSCTCCC	1e0	-9.266e-01	0.8577	43.0	6.55%	29.4	6.33%
E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer	DNRCAGCTGY	1e0	-8.846e-01	0.8893	24.0	3.66%	16.7	3.60%
Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer	AWWNTGCTGAGTCAT	1e0	-8.841e-01	0.8893	2.0	0.30%	0.0	0.00%
Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer	ATGAATATTC	1e0	-8.841e-01	0.8893	2.0	0.30%	0.0	0.00%
Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer	ACTYKNATTCGTGNTACTTC	1e0	-8.841e-01	0.8893	2.0	0.30%	0.0	0.00%
E-box(bHLH)/Promoter/Homer	SSGGTCACGTGA	1e0	-8.841e-01	0.8893	2.0	0.30%	0.2	0.04%
ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer	VAGGTCACNSTGACC	1e0	-8.841e-01	0.8893	2.0	0.30%	1.6	0.35%
ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer	RCAGGATGTGGT	1e0	-8.841e-01	0.8893	2.0	0.30%	0.3	0.05%
GFY-Staf(?,Zf)/Promoter/Homer	RACTACAATTCCCAGAAKGC	1e0	-8.841e-01	0.8893	2.0	0.30%	0.2	0.04%
JunD(bZIP)/K562-JunD-ChIP-Seq/Homer	ATGACGTCATCN	1e0	-8.841e-01	0.8893	2.0	0.30%	1.3	0.29%
NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer	GATGACTCAGCA	1e0	-8.841e-01	0.8893	2.0	0.30%	0.0	0.00%
NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer	GGAAATTCCC	1e0	-8.841e-01	0.8893	2.0	0.30%	0.0	0.00%
Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer	HTGCTGAGTCAT	1e0	-8.841e-01	0.8893	2.0	0.30%	0.0	0.00%
OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer	YATGCATATRCATRT	1e0	-8.841e-01	0.8893	2.0	0.30%	0.0	0.00%
p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer	NNDRCATGYCYNRRCATGYH	1e0	-8.841e-01	0.8893	2.0	0.30%	0.8	0.16%
Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer	GTTGCCATGGCAACM	1e0	-8.841e-01	0.8893	2.0	0.30%	0.3	0.06%
RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer	CGGTTGCCATGGCAAC	1e0	-8.841e-01	0.8893	2.0	0.30%	0.3	0.06%
Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer	RACTACAACTCCCAGVAKGC	1e0	-8.841e-01	0.8893	2.0	0.30%	0.2	0.04%
VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer	ARAGGTCANWGAGTTCANNN	1e0	-8.841e-01	0.8893	2.0	0.30%	0.0	0.00%
Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer	CCCCTCCCCCAC	1e0	-8.841e-01	0.8893	2.0	0.30%	1.0	0.21%
ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer	GAGSCCGAGC	1e0	-8.841e-01	0.8893	2.0	0.30%	0.6	0.13%
Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer	AGGVNCCTTTGT	1e0	-8.622e-01	0.8893	21.0	3.20%	14.0	3.02%
ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer	ACVAGGAAGT	1e0	-8.379e-01	0.8893	18.0	2.74%	12.7	2.73%
Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer	RSCACTYRAG	1e0	-8.285e-01	0.8893	88.0	13.41%	61.1	13.15%
MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer	GGCVGTTR	1e0	-8.024e-01	0.8893	55.0	8.38%	38.9	8.37%
Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer	ASATCAAAGGVA	1e0	-8.011e-01	0.8893	25.0	3.81%	17.8	3.84%
Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer	VGCTGWCAVB	1e0	-7.796e-01	0.8893	42.0	6.40%	30.0	6.45%
Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	HTTTCCCASG	1e0	-7.640e-01	0.8893	49.0	7.47%	34.4	7.40%
GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer	RACCGGAAGT	1e0	-7.270e-01	0.8977	26.0	3.96%	18.5	3.98%
c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer	VVCCACGTGG	1e0	-6.973e-01	0.9201	6.0	0.91%	4.4	0.94%
Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer	NRYTTCCGGY	1e0	-6.791e-01	0.9322	13.0	1.98%	9.6	2.06%
Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer	CAAAGGTCAG	1e0	-6.386e-01	0.9658	55.0	8.38%	39.1	8.42%
Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer	ACAGCTGTTN	1e0	-6.341e-01	0.9658	62.0	9.45%	44.5	9.57%
Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer	YCTTTGTTCC	1e0	-6.320e-01	0.9658	24.0	3.66%	17.4	3.75%
STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer	ABTTCYYRRGAA	1e0	-6.320e-01	0.9658	24.0	3.66%	17.3	3.72%
EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer	DGTCCCYRGGGA	1e0	-6.208e-01	0.9658	3.0	0.46%	2.2	0.48%
Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer	GGGGCTYGKCTGGGA	1e0	-6.208e-01	0.9658	3.0	0.46%	2.2	0.47%
ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer	GTGGGCCCCA	1e0	-6.208e-01	0.9658	3.0	0.46%	2.2	0.47%
Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer	CCWTTGTY	1e0	-6.189e-01	0.9658	52.0	7.93%	37.7	8.11%
Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer	VBSYGTCTGG	1e0	-5.758e-01	0.9887	32.0	4.88%	23.4	5.03%
RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	GGGRAARRGRMCAGMTG	1e0	-5.483e-01	1.0000	11.0	1.68%	8.2	1.76%
HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer	CARRGKBCAAAGTYCA	1e0	-4.887e-01	1.0000	8.0	1.22%	6.4	1.38%
Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer	ATATGCAAAT	1e0	-4.780e-01	1.0000	12.0	1.83%	9.6	2.06%
Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	CTGGCAGSCTGCCA	1e0	-4.780e-01	1.0000	12.0	1.83%	9.8	2.11%
ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer	ACAGGAAGTG	1e0	-4.622e-01	1.0000	49.0	7.47%	36.2	7.80%
Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer	GKTAATGR	1e0	-4.556e-01	1.0000	148.0	22.56%	107.6	23.15%
TATA-Box(TBP)/Promoter/Homer	CCTTTTAWAGSC	1e0	-4.547e-01	1.0000	42.0	6.40%	31.8	6.85%
CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer	ATTGCGCAAC	1e0	-4.412e-01	1.0000	24.0	3.66%	18.6	3.99%
Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer	VCAGCTGYTG	1e0	-3.705e-01	1.0000	18.0	2.74%	14.6	3.13%
ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer	RGGGCACTAACY	1e0	-3.322e-01	1.0000	19.0	2.90%	15.0	3.24%
BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer	GNCACGTG	1e0	-3.258e-01	1.0000	50.0	7.62%	38.0	8.18%
Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer	CTGTTTAC	1e0	-3.072e-01	1.0000	47.0	7.16%	36.8	7.91%
Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)	NNAYTTCCTGHN	1e0	-2.980e-01	1.0000	32.0	4.88%	25.5	5.48%
RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer	AGGTCAAGGTCA	1e0	-2.782e-01	1.0000	1.0	0.15%	0.8	0.17%
E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer	VDTTTCCCGCCA	1e0	-2.782e-01	1.0000	1.0	0.15%	0.2	0.04%
Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer	NGCGTGGGCGGR	1e0	-2.782e-01	1.0000	1.0	0.15%	0.7	0.16%
GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer	CGTGGGTGGTCC	1e0	-2.782e-01	1.0000	1.0	0.15%	1.9	0.40%
LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer	RGGTTACTANAGGTCA	1e0	-2.782e-01	1.0000	1.0	0.15%	1.9	0.41%
NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WNTGTTTRYTTTGGCA	1e0	-2.782e-01	1.0000	1.0	0.15%	0.3	0.06%
NRF(NRF)/Promoter/Homer	STGCGCATGCGC	1e0	-2.782e-01	1.0000	1.0	0.15%	0.6	0.14%
OCT:OCT(POU,Homeobox,IR1)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer	ATGAATWATTCATGA	1e0	-2.782e-01	1.0000	1.0	0.15%	0.0	0.00%
NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer	GGGGGAATCCCC	1e0	-2.782e-01	1.0000	1.0	0.15%	0.7	0.14%
Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCHGATTAC	1e0	-2.782e-01	1.0000	1.0	0.15%	0.0	0.00%
Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer	NRAACCRGTTYRAACCRGYT	1e0	-2.782e-01	1.0000	1.0	0.15%	0.0	0.00%
TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer	GTCACGTGACYV	1e0	-2.782e-01	1.0000	1.0	0.15%	0.0	0.00%
ZFP3(Zf)/HEK293-ZFP3.GFP-ChIP-Seq(GSE58341)/Homer	GGGTTTTGAAGGATGARTAGGAGTT	1e0	-2.782e-01	1.0000	1.0	0.15%	0.0	0.00%
ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer	SMCAGTCWGAKGGAGGAGGC	1e0	-2.782e-01	1.0000	1.0	0.15%	1.3	0.28%
Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer	BTCAAGGTCA	1e0	-2.583e-01	1.0000	8.0	1.22%	7.4	1.60%
Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer	SNGCACCTGCHS	1e0	-2.583e-01	1.0000	8.0	1.22%	7.4	1.60%
c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer	VCCACGTG	1e0	-2.559e-01	1.0000	2.0	0.30%	2.9	0.63%
GFY(?)/Promoter/Homer	ACTACAATTCCC	1e0	-2.559e-01	1.0000	2.0	0.30%	2.2	0.47%
Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer	ASWTCAAAGG	1e0	-2.501e-01	1.0000	13.0	1.98%	11.1	2.39%
E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer	BTKGGCGGGAAA	1e0	-2.272e-01	1.0000	9.0	1.37%	8.6	1.85%
PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer	ADGGYAGYAGCATCT	1e0	-2.272e-01	1.0000	9.0	1.37%	9.0	1.93%
HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer	NTATYGATCH	1e0	-2.040e-01	1.0000	28.0	4.27%	23.1	4.97%
HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer	GCACGTACCC	1e0	-2.027e-01	1.0000	4.0	0.61%	4.4	0.96%
ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer	VCAGGTRDRY	1e0	-1.988e-01	1.0000	24.0	3.66%	20.4	4.38%
Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer	RAACAATGGN	1e0	-1.894e-01	1.0000	33.0	5.03%	28.0	6.02%
E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	NVCACCTGBN	1e0	-1.857e-01	1.0000	29.0	4.42%	24.5	5.27%
Brachyury(T-box)/Mesoendoderm-Brachyury-ChIP-exo(GSE54963)/Homer	ANTTMRCASBNNNGTGYKAAN	1e0	-1.807e-01	1.0000	5.0	0.76%	5.9	1.26%
HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer	GTTAATNATTAA	1e0	-1.807e-01	1.0000	5.0	0.76%	5.5	1.18%
Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer	GTCATGCHTGRCTGS	1e0	-1.807e-01	1.0000	5.0	0.76%	5.8	1.24%
Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer	RTCACSCCAY	1e0	-1.807e-01	1.0000	5.0	0.76%	6.0	1.28%
Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer	DGTAAACA	1e0	-1.802e-01	1.0000	25.0	3.81%	21.8	4.70%
Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer	CYAAAAATAG	1e0	-1.790e-01	1.0000	11.0	1.68%	10.9	2.35%
Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer	NNTGTGGATTSS	1e0	-1.722e-01	1.0000	21.0	3.20%	18.9	4.06%
PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer	ACTTTCACTTTC	1e0	-1.599e-01	1.0000	12.0	1.83%	11.5	2.47%
STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer	TTCCKNAGAA	1e0	-1.410e-01	1.0000	23.0	3.51%	20.5	4.41%
STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer	NYTTCCWGGAAR	1e0	-1.174e-01	1.0000	34.0	5.18%	29.3	6.31%
Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer	NNNVCTGWGYAAACASN	1e0	-1.160e-01	1.0000	25.0	3.81%	22.2	4.77%
KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer	DGGGYGKGGC	1e0	-9.463e-02	1.0000	17.0	2.59%	16.6	3.56%
Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer	TGTTKCCTAGCAACM	1e0	-8.778e-02	1.0000	23.0	3.51%	21.9	4.71%
STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer	RTTTCTNAGAAA	1e0	-8.677e-02	1.0000	12.0	1.83%	12.3	2.64%
CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	NTNATGCAAYMNNHTGMAAY	1e0	-8.160e-02	1.0000	3.0	0.46%	4.8	1.04%
ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer	GAGCCTGGTACTGWGCCTGR	1e0	-8.160e-02	1.0000	3.0	0.46%	4.1	0.88%
Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer	GGTTAAWCATTAA	1e0	-8.028e-02	1.0000	4.0	0.61%	5.0	1.09%
Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer	HNRAATCAAT	1e0	-7.972e-02	1.0000	24.0	3.66%	22.5	4.84%
Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer	CTTCCGGGAA	1e0	-7.869e-02	1.0000	13.0	1.98%	13.4	2.87%
Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer	AGGTGHCAGACA	1e0	-7.772e-02	1.0000	2.0	0.30%	3.6	0.77%
YY1(Zf)/Promoter/Homer	CAAGATGGCGGC	1e0	-7.772e-02	1.0000	2.0	0.30%	3.0	0.66%
CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer	GHCACGTG	1e0	-7.217e-02	1.0000	6.0	0.91%	7.5	1.62%
Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer	CCATTGTTNY	1e0	-6.841e-02	1.0000	49.0	7.47%	42.9	9.24%
HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer	TTTTATKRGG	1e0	-6.277e-02	1.0000	41.0	6.25%	36.4	7.83%
Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer	RCCACGTGGYYN	1e0	-6.244e-02	1.0000	8.0	1.22%	9.5	2.04%
FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	AGTAAACAAAAAAGAACAND	1e0	-6.059e-02	1.0000	1.0	0.15%	2.9	0.61%
PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer	RGGTCTCTAACY	1e0	-6.059e-02	1.0000	1.0	0.15%	2.1	0.44%
ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer	ARGAGGMCAAAATGW	1e0	-6.059e-02	1.0000	1.0	0.15%	2.3	0.50%
EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer	VACAGGAAAT	1e0	-5.905e-02	1.0000	16.0	2.44%	16.1	3.46%
Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer	RGKGGGCGGAGC	1e0	-5.905e-02	1.0000	16.0	2.44%	16.1	3.46%
PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer	AAGAACATWHTGTTC	1e0	-5.772e-02	1.0000	9.0	1.37%	10.3	2.23%
STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer	NATTTCCNGGAAAT	1e0	-5.772e-02	1.0000	9.0	1.37%	10.7	2.30%
Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer	CTGTCTGG	1e0	-5.462e-02	1.0000	28.0	4.27%	26.4	5.67%
Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer	SVYTTCCNGGAARB	1e0	-5.375e-02	1.0000	17.0	2.59%	17.2	3.71%
KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer	RGKGGGCGKGGC	1e0	-5.294e-02	1.0000	23.0	3.51%	22.3	4.81%
Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer	BTCAAGGTCA	1e0	-4.900e-02	1.0000	11.0	1.68%	12.1	2.61%
Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer	TAATTAGN	1e0	-4.405e-02	1.0000	45.0	6.86%	40.5	8.71%
AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer	CCAGGAACAG	1e0	-3.255e-02	1.0000	92.0	14.02%	77.2	16.62%
PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer	TGACCTTTGCCCCA	1e0	-3.204e-02	1.0000	16.0	2.44%	17.1	3.68%
Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer	TGACCTTTNCNT	1e0	-3.085e-02	1.0000	5.0	0.76%	7.1	1.53%
Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer	BSNTGTTTACWYWGN	1e0	-3.056e-02	1.0000	6.0	0.91%	8.2	1.78%
Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer	GKVTCADRTTWC	1e0	-3.056e-02	1.0000	6.0	0.91%	8.1	1.74%
Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer	GGTGYTGACAGS	1e0	-3.018e-02	1.0000	4.0	0.61%	7.0	1.50%
Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer	GTCACGTGGT	1e0	-3.018e-02	1.0000	4.0	0.61%	6.1	1.31%
OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer	ATGCATWATGCATRW	1e0	-2.822e-02	1.0000	24.0	3.66%	24.5	5.28%
KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer	NRGCCCCRCCCHBNN	1e0	-2.794e-02	1.0000	3.0	0.46%	5.3	1.15%
HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer	NCYAATAAAA	1e0	-2.635e-02	1.0000	46.0	7.01%	42.6	9.16%
HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer	RTACGTGC	1e0	-2.551e-02	1.0000	10.0	1.52%	12.7	2.74%
HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer	VCAGCTGBNN	1e0	-2.525e-02	1.0000	31.0	4.73%	30.4	6.54%
RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer	TAGGGCAAAGGTCA	1e0	-2.473e-02	1.0000	19.0	2.90%	20.5	4.41%
Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer	CGGTCACSCCAC	1e0	-2.316e-02	1.0000	2.0	0.30%	4.0	0.86%
USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer	SGTCACGTGR	1e0	-2.316e-02	1.0000	2.0	0.30%	4.1	0.88%
TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer	CCWGGAATGY	1e0	-2.181e-02	1.0000	38.0	5.79%	36.6	7.87%
HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer	RTTATGYAAB	1e0	-2.104e-02	1.0000	33.0	5.03%	32.3	6.95%
NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer	NVCACGTG	1e0	-1.660e-02	1.0000	41.0	6.25%	39.1	8.43%
Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer	GGGGGGGG	1e0	-1.549e-02	1.0000	17.0	2.59%	19.9	4.29%
bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer	KCACGTGMCN	1e0	-1.429e-02	1.0000	1.0	0.15%	3.1	0.67%
PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer	GGAAGTGAAAST	1e0	-1.429e-02	1.0000	1.0	0.15%	3.8	0.82%
bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer	NAGTTTCABTHTGACTNW	1e0	-1.236e-02	1.0000	8.0	1.22%	11.3	2.44%
FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer	SCHTGTTTACAT	1e0	-1.126e-02	1.0000	21.0	3.20%	23.5	5.06%
Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer	TGCGTGGGYG	1e0	-1.079e-02	1.0000	4.0	0.61%	7.3	1.58%
Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAW	1e0	-1.038e-02	1.0000	22.0	3.35%	24.1	5.19%
Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer	AAGCACTTAA	1e0	-9.618e-03	1.0000	47.0	7.16%	45.9	9.88%
COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer	AGRGGTCA	1e0	-9.559e-03	1.0000	36.0	5.49%	36.1	7.78%
FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer	NVWTGTTTAC	1e0	-9.464e-03	1.0000	30.0	4.57%	31.8	6.84%
CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer	DRTGTTGCAA	1e0	-8.806e-03	1.0000	24.0	3.66%	26.2	5.64%
Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer	CYTGTTTACWYW	1e0	-4.302e-03	1.0000	15.0	2.29%	20.0	4.30%
Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer	TTRAGTGSYK	1e0	-3.834e-03	1.0000	57.0	8.69%	55.9	12.04%
NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer	KCCACGTGAC	1e0	-3.209e-03	1.0000	20.0	3.05%	25.0	5.38%
CHR(?)/Hela-CellCycle-Expression/Homer	SRGTTTCAAA	1e0	-3.151e-03	1.0000	29.0	4.42%	32.1	6.90%
FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer	WWTRTAAACAVG	1e0	-2.435e-03	1.0000	24.0	3.66%	28.2	6.07%
NFY(CCAAT)/Promoter/Homer	RGCCAATSRG	1e0	-2.059e-03	1.0000	14.0	2.13%	19.6	4.21%
FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WAAGTAAACA	1e0	-1.354e-03	1.0000	39.0	5.95%	42.4	9.13%
ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer	AGGCCTAG	1e0	-1.032e-03	1.0000	35.0	5.34%	39.1	8.43%
FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer	TRTTTACTTW	1e0	-8.740e-04	1.0000	37.0	5.64%	42.0	9.03%
LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer	AAGACCCYYN	1e0	-8.700e-04	1.0000	16.0	2.44%	23.0	4.95%
PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer	ACCRTGACTAATTNN	1e0	-8.400e-04	1.0000	9.0	1.37%	15.2	3.27%
ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer	AGTTTCASTTTC	1e0	-8.190e-04	1.0000	1.0	0.15%	5.9	1.28%
Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer	BCCATTGTTC	1e0	-7.100e-04	1.0000	21.0	3.20%	27.8	5.99%
EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer	ATTTCCTGTN	1e0	-5.670e-04	1.0000	25.0	3.81%	31.1	6.71%
FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer	WAAGTAAACA	1e0	-5.030e-04	1.0000	36.0	5.49%	41.7	8.97%
NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer	SARTGGAAAAWRTGAGTCAB	1e0	-3.650e-04	1.0000	11.0	1.68%	18.5	3.97%
ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer	AGGCCTRG	1e0	-3.020e-04	1.0000	23.0	3.51%	30.8	6.62%
NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer	CYTGGCABNSTGCCAR	1e0	-2.910e-04	1.0000	8.0	1.22%	15.4	3.31%
IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer	GRAASTGAAAST	1e0	-2.120e-04	1.0000	6.0	0.91%	13.8	2.97%
IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer	GAAASYGAAASY	1e0	-1.960e-04	1.0000	1.0	0.15%	6.2	1.34%
ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer	TGGAACAGMA	1e0	-1.590e-04	1.0000	19.0	2.90%	27.4	5.89%
IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer	ACTGAAACCA	1e0	-2.000e-05	1.0000	11.0	1.68%	21.8	4.69%
IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer	GAAAGTGAAAGT	1e0	-6.000e-06	1.0000	3.0	0.46%	12.7	2.74%
IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer	AGTTTCAKTTTC	1e0	-5.000e-06	1.0000	9.0	1.37%	20.6	4.44%
Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer	ATGMATATDC	1e0	-0.000e+00	1.0000	33.0	5.03%	56.3	12.11%
PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	MGGAAGTGAAAC	1e0	-0.000e+00	1.0000	35.0	5.34%	61.8	13.30%
CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer	TGCAGTTCCMVNWRTGGCCA	1e0	0.000e+00	1.0000	0.0	0.00%	0.0	0.00%
RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer	RGGTCADNNAGAGGTCAV	1e0	0.000e+00	1.0000	0.0	0.00%	0.2	0.04%
DUX4(Homeobox)/Myoblasts-DUX4.V5-ChIP-Seq(GSE75791)/Homer	NWTAAYCYAATCAWN	1e0	0.000e+00	1.0000	0.0	0.00%	0.3	0.07%
E2F(E2F)/Hela-CellCycle-Expression/Homer	TTSGCGCGAAAA	1e0	0.000e+00	1.0000	0.0	0.00%	0.2	0.04%
EBNA1(EBV-virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer	GGYAGCAYDTGCTDCCCNNN	1e0	0.000e+00	1.0000	0.0	0.00%	0.0	0.00%
GFX(?)/Promoter/Homer	ATTCTCGCGAGA	1e0	0.000e+00	1.0000	0.0	0.00%	0.0	0.00%
HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer	TACGTGCV	1e0	0.000e+00	1.0000	0.0	0.00%	1.7	0.36%
Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer	GCCACRCCCACY	1e0	0.000e+00	1.0000	0.0	0.00%	1.3	0.28%
NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer	CTGCGCATGCGC	1e0	0.000e+00	1.0000	0.0	0.00%	0.7	0.15%
OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer	ATGAATATTCATGAG	1e0	0.000e+00	1.0000	0.0	0.00%	0.0	0.00%
p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer	RRCATGYCYRGRCATGYYYN	1e0	0.000e+00	1.0000	0.0	0.00%	0.0	0.00%
p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer	ACATGCCCGGGCAT	1e0	0.000e+00	1.0000	0.0	0.00%	0.0	0.00%
p53(p53)/Saos-p53-ChIP-Seq/Homer	RRCATGYCYRGRCATGYYYN	1e0	0.000e+00	1.0000	0.0	0.00%	0.0	0.00%
p73(p53)/Trachea-p73-ChIP-Seq(PRJNA310161)/Homer	NRRRCAWGTCCDGRCATGYY	1e0	0.000e+00	1.0000	0.0	0.00%	0.0	0.00%
PAX6(Paired,Homeobox)/Forebrain-Pax6-ChIP-Seq(GSE66961)/Homer	NGTGTTCAVTSAAGCGKAAA	1e0	0.000e+00	1.0000	0.0	0.00%	0.4	0.09%
RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer	AGGTCAAGGTCA	1e0	0.000e+00	1.0000	0.0	0.00%	0.5	0.11%
REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer	GGMGCTGTCCATGGTGCTGA	1e0	0.000e+00	1.0000	0.0	0.00%	0.0	0.00%
Sp1(Zf)/Promoter/Homer	GGCCCCGCCCCC	1e0	0.000e+00	1.0000	0.0	0.00%	0.8	0.17%
T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer	ACTTTCGTTTCT	1e0	0.000e+00	1.0000	0.0	0.00%	0.0	0.00%
ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer	GGVTCTCGCGAGAAC	1e0	0.000e+00	1.0000	0.0	0.00%	0.1	0.03%
ZNF136(Zf)/HEK293-ZNF136.GFP-ChIP-Seq(GSE58341)/Homer	YTKGATAHAGTATTCTWGGTNGGCA	1e0	0.000e+00	1.0000	0.0	0.00%	0.7	0.14%
ZNF16(Zf)/HEK293-ZNF16.GFP-ChIP-Seq(GSE58341)/Homer	MACCTTCYATGGCTCCCTAKTGCCY	1e0	0.000e+00	1.0000	0.0	0.00%	0.0	0.00%
ZNF382(Zf)/HEK293-ZNF382.GFP-ChIP-Seq(GSE58341)/Homer	GNCTGTASTRNTGBCTCHTT	1e0	0.000e+00	1.0000	0.0	0.00%	0.0	0.00%
ZNF41(Zf)/HEK293-ZNF41.GFP-ChIP-Seq(GSE58341)/Homer	CCTCATGGTGYCYTWYTCCCTTGTG	1e0	0.000e+00	1.0000	0.0	0.00%	5.7	1.23%
ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer	AGAAATGACTTCCCT	1e0	0.000e+00	1.0000	0.0	0.00%	0.0	0.00%
ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer	GARTGGTCATCGCCC	1e0	0.000e+00	1.0000	0.0	0.00%	0.2	0.04%