Information for 5-GTGTAATCAA (Motif 5)

T C A G C A G T C T A G A G C T C T G A C G T A C G A T T G A C T G C A T G C A
Reverse Opposite:
A C G T A C G T A C T G C G T A G C A T G A C T T C G A G A T C G T C A A G T C
p-value:1e-59
log p-value:-1.380e+02
Information Content per bp:1.663
Number of Target Sequences with motif51.0
Percentage of Target Sequences with motif7.77%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.25%
Average Position of motif in Targets51.0 +/- 24.7bp
Average Position of motif in Background57.8 +/- 10.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEOX2/MA0706.1/Jaspar

Match Rank:1
Score:0.72
Offset:1
Orientation:forward strand
Alignment:GTGTAATCAA-
-AGTAATTAAC
 T C A G C A G T C T A G A G C T C T G A C G T A C G A T T G A C T G C A T G C A A C G T
A C G T C T G A T A C G G A C T T G C A G T C A C A G T A G C T C T G A C G T A T G A C

HOXA10/MA0899.1/Jaspar

Match Rank:2
Score:0.70
Offset:1
Orientation:forward strand
Alignment:GTGTAATCAA--
-GGTAATAAAAA
 T C A G C A G T C T A G A G C T C T G A C G T A C G A T T G A C T G C A T G C A A C G T A C G T
A C G T C T A G T C A G G A C T T G C A T C G A G C A T C G T A C G T A G T C A G T C A G T C A

PB0001.1_Arid3a_1/Jaspar

Match Rank:3
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---GTGTAATCAA----
NNNTTTTAATTAANNNN
 A C G T A C G T A C G T T C A G C A G T C T A G A G C T C T G A C G T A C G A T T G A C T G C A T G C A A C G T A C G T A C G T A C G T
C T A G C G T A C G T A C A G T G C A T G A C T A G C T C T G A C G T A C G A T G A C T T C G A C T G A C G T A T G A C T A G C A T G C

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:4
Score:0.69
Offset:1
Orientation:forward strand
Alignment:GTGTAATCAA-
-HNRAATCAAT
 T C A G C A G T C T A G A G C T C T G A C G T A C G A T T G A C T G C A T G C A A C G T
A C G T G C T A A C T G T C G A C T G A C T G A A C G T T A G C C T G A C G T A C G A T

Hoxd9/MA0913.1/Jaspar

Match Rank:5
Score:0.69
Offset:2
Orientation:forward strand
Alignment:GTGTAATCAA--
--GCAATAAAAA
 T C A G C A G T C T A G A G C T C T G A C G T A C G A T T G A C T G C A T G C A A C G T A C G T
A C G T A C G T T C A G G A T C T G C A C T G A C G A T G C T A G C T A G C T A C G T A G C T A

LMX1B/MA0703.1/Jaspar

Match Rank:6
Score:0.69
Offset:2
Orientation:forward strand
Alignment:GTGTAATCAA
--TTAATTAA
 T C A G C A G T C T A G A G C T C T G A C G T A C G A T T G A C T G C A T G C A
A C G T A C G T A C G T G A C T C G T A G C T A C G A T C G A T G C T A T C G A

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:7
Score:0.68
Offset:2
Orientation:forward strand
Alignment:GTGTAATCAA--
--GTCATAAAAN
 T C A G C A G T C T A G A G C T C T G A C G T A C G A T T G A C T G C A T G C A A C G T A C G T
A C G T A C G T T C A G A G C T G T A C C G T A A C G T C G T A C G T A C G T A G C T A G A C T

CDX1/MA0878.1/Jaspar

Match Rank:8
Score:0.68
Offset:2
Orientation:forward strand
Alignment:GTGTAATCAA-
--GCAATAAAA
 T C A G C A G T C T A G A G C T C T G A C G T A C G A T T G A C T G C A T G C A A C G T
A C G T A C G T T C A G G A T C G T C A T C G A G C A T G C T A C G T A G C T A G T C A

Dux/MA0611.1/Jaspar

Match Rank:9
Score:0.68
Offset:2
Orientation:forward strand
Alignment:GTGTAATCAA
--CCAATCAA
 T C A G C A G T C T A G A G C T C T G A C G T A C G A T T G A C T G C A T G C A
A C G T A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:10
Score:0.68
Offset:3
Orientation:forward strand
Alignment:GTGTAATCAA---
---TAATCAATTA
 T C A G C A G T C T A G A G C T C T G A C G T A C G A T T G A C T G C A T G C A A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C T G A C G T A A G C T A G T C T G C A C T G A A C G T A G C T G C T A