Information for 25-AGGTGAGTCC (Motif 29)

C G T A C A T G T A C G C G A T T C A G C G T A A C T G C G A T A G T C G A T C
Reverse Opposite:
C T A G T C A G G C T A G T A C G C A T A G T C G C T A A T G C G A T C G C A T
p-value:1e-11
log p-value:-2.687e+01
Information Content per bp:1.451
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif4.42%
Number of Background Sequences with motif4.2
Percentage of Background Sequences with motif0.91%
Average Position of motif in Targets53.1 +/- 25.3bp
Average Position of motif in Background43.0 +/- 14.7bp
Strand Bias (log2 ratio + to - strand density)1.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-AGGTGAGTCC
CAGGTAAGTAT
 A C G T C G T A C A T G T A C G C G A T T C A G C G T A A C T G C G A T A G T C G A T C
T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T

ZEB1/MA0103.2/Jaspar

Match Rank:2
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-AGGTGAGTCC
CAGGTGAGG--
 A C G T C G T A C A T G T A C G C G A T T C A G C G T A A C T G C G A T A G T C G A T C
A G T C C G T A A C T G A C T G A C G T C T A G G C T A C T A G A C T G A C G T A C G T

FOSL1/MA0477.1/Jaspar

Match Rank:3
Score:0.67
Offset:1
Orientation:forward strand
Alignment:AGGTGAGTCC--
-GGTGACTCATG
 C G T A C A T G T A C G C G A T T C A G C G T A A C T G C G A T A G T C G A T C A C G T A C G T
A C G T C T A G T C A G A C G T A C T G C G T A T A G C A C G T G T A C C G T A A C G T T A C G

NFKB1/MA0105.4/Jaspar

Match Rank:4
Score:0.65
Offset:0
Orientation:forward strand
Alignment:AGGTGAGTCC---
AGGGGAATCCCCT
 C G T A C A T G T A C G C G A T T C A G C G T A A C T G C G A T A G T C G A T C A C G T A C G T A C G T
T G C A C T A G A T C G C A T G C T A G T C G A C G T A A G C T G A T C G T A C G T A C G A T C A C G T

JUNB/MA0490.1/Jaspar

Match Rank:5
Score:0.65
Offset:0
Orientation:forward strand
Alignment:AGGTGAGTCC-
GGATGACTCAT
 C G T A C A T G T A C G C G A T T C A G C G T A A C T G C G A T A G T C G A T C A C G T
C A T G C T A G T C G A A C G T A C T G C G T A A T G C A C G T G T A C C G T A A C G T

JUN(var.2)/MA0489.1/Jaspar

Match Rank:6
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---AGGTGAGTCC-
AGGAGATGACTCAT
 A C G T A C G T A C G T C G T A C A T G T A C G C G A T T C A G C G T A A C T G C G A T A G T C G A T C A C G T
C T G A C T A G C T A G C T G A C T A G T C G A A C G T A C T G C G T A A T G C C G A T G T A C C G T A A C G T

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:AGGTGAGTCC-
-GATGAGTCAT
 C G T A C A T G T A C G C G A T T C A G C G T A A C T G C G A T A G T C G A T C A C G T
A C G T T A C G T G C A C G A T C A T G C G T A A T C G C G A T G T A C C G T A A G C T

Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer

Match Rank:8
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:AGGTGAGTCC---
-GATGAGTCATCC
 C G T A C A T G T A C G C G A T T C A G C G T A A C T G C G A T A G T C G A T C A C G T A C G T A C G T
A C G T C T A G T C G A G A C T A C T G C G T A A T C G C G A T T G A C C G T A A G C T G A T C G T A C

Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.64
Offset:1
Orientation:forward strand
Alignment:AGGTGAGTCC---
-NATGACTCATNN
 C G T A C A T G T A C G C G A T T C A G C G T A A C T G C G A T A G T C G A T C A C G T A C G T A C G T
A C G T C T A G T C G A A C G T A C T G C G T A T A G C C G A T G T A C C G T A A G C T G A T C G T A C

PB0142.1_Jundm2_2/Jaspar

Match Rank:10
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-AGGTGAGTCC-----
NNGGTGACTCATCANN
 A C G T C G T A C A T G T A C G C G A T T C A G C G T A A C T G C G A T A G T C G A T C A C G T A C G T A C G T A C G T A C G T
C A G T G A C T C A T G T C A G A G C T A C T G C G T A A T G C C A G T T G A C C T G A A G C T G A T C T G C A G T C A A C G T