Information for 22-ACCTATATTC (Motif 22)

C G T A G A T C T G A C A G C T C G T A C G A T G T C A C G A T C G A T A G T C
Reverse Opposite:
C T A G C G T A G C T A C A G T G C T A G C A T C T G A A C T G C T A G C G A T
p-value:1e-19
log p-value:-4.541e+01
Information Content per bp:1.694
Number of Target Sequences with motif39.0
Percentage of Target Sequences with motif5.95%
Number of Background Sequences with motif4.3
Percentage of Background Sequences with motif0.93%
Average Position of motif in Targets43.0 +/- 24.8bp
Average Position of motif in Background15.4 +/- 12.1bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RORA(var.2)/MA0072.1/Jaspar

Match Rank:1
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---ACCTATATTC-
TTGACCTANTTATN
 A C G T A C G T A C G T C G T A G A T C T G A C A G C T C G T A C G A T G T C A C G A T C G A T A G T C A C G T
A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A

RORA/MA0071.1/Jaspar

Match Rank:2
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--ACCTATATTC
TGACCTTGAT--
 A C G T A C G T C G T A G A T C T G A C A G C T C G T A C G A T G T C A C G A T C G A T A G T C
A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T A C G T A C G T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:3
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--ACCTATATTC
TGACCTARTT--
 A C G T A C G T C G T A G A T C T G A C A G C T C G T A C G A T G T C A C G A T C G A T A G T C
A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T A C G T A C G T

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:ACCTATATTC--
--CTATTTTTGG
 C G T A G A T C T G A C A G C T C G T A C G A T G T C A C G A T C G A T A G T C A C G T A C G T
A C G T A C G T A T G C A G C T G T C A C G A T C G A T A G C T G A C T G C A T C T G A C A T G

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:5
Score:0.59
Offset:1
Orientation:forward strand
Alignment:ACCTATATTC-
-YCTTTGTTCC
 C G T A G A T C T G A C A G C T C G T A C G A T G T C A C G A T C G A T A G T C A C G T
A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C

PB0137.1_Irf3_2/Jaspar

Match Rank:6
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----ACCTATATTC
NNGCACCTTTCTCC
 A C G T A C G T A C G T A C G T C G T A G A T C T G A C A G C T C G T A C G A T G T C A C G A T C G A T A G T C
A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C

Sox3/MA0514.1/Jaspar

Match Rank:7
Score:0.57
Offset:1
Orientation:forward strand
Alignment:ACCTATATTC-
-CCTTTGTTTT
 C G T A G A T C T G A C A G C T C G T A C G A T G T C A C G A T C G A T A G T C A C G T
A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

SNAI2/MA0745.1/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--ACCTATATTC
NCACCTGTN---
 A C G T A C G T C G T A G A T C T G A C A G C T C G T A C G A T G T C A C G A T C G A T A G T C
T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T A C G T A C G T A C G T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:9
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----ACCTATATTC
RYHYACCTGB----
 A C G T A C G T A C G T A C G T C G T A G A T C T G A C A G C T C G T A C G A T G T C A C G A T C G A T A G T C
T C A G A G C T G C T A A G T C C G T A G T A C A T G C A C G T A C T G A C G T A C G T A C G T A C G T A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:10
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---ACCTATATTC----
NNNTCCTTTGTTCTNNN
 A C G T A C G T A C G T C G T A G A T C T G A C A G C T C G T A C G A T G T C A C G A T C G A T A G T C A C G T A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T