Information for 19-GTGTGGTTTA (Motif 18)

A C T G C G A T A C T G C A G T C A T G A C T G A G C T C A G T A C G T G T C A
Reverse Opposite:
C A G T C G T A G C T A T C G A G T A C G A T C G T C A T G A C C G T A T A G C
p-value:1e-23
log p-value:-5.418e+01
Information Content per bp:1.689
Number of Target Sequences with motif33.0
Percentage of Target Sequences with motif5.03%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.49%
Average Position of motif in Targets50.7 +/- 26.8bp
Average Position of motif in Background43.7 +/- 12.3bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:1
Score:0.87
Offset:-1
Orientation:reverse strand
Alignment:-GTGTGGTTTA
NNTGTGGTTT-
 A C G T A C T G C G A T A C T G C A G T C A T G A C T G A G C T C A G T A C G T G T C A
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:2
Score:0.84
Offset:-2
Orientation:forward strand
Alignment:--GTGTGGTTTA
GTCTGTGGTTT-
 A C G T A C G T A C T G C G A T A C T G C A G T C A T G A C T G A G C T C A G T A C G T G T C A
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.83
Offset:0
Orientation:reverse strand
Alignment:GTGTGGTTTA
CTGTGGTTTN
 A C T G C G A T A C T G C A G T C A T G A C T G A G C T C A G T A C G T G T C A
G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.83
Offset:-1
Orientation:forward strand
Alignment:-GTGTGGTTTA
GCTGTGGTTT-
 A C G T A C T G C G A T A C T G C A G T C A T G A C T G A G C T C A G T A C G T G T C A
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:5
Score:0.82
Offset:-2
Orientation:reverse strand
Alignment:--GTGTGGTTTA
NNHTGTGGTTWN
 A C G T A C G T A C T G C G A T A C T G C A G T C A T G A C T G A G C T C A G T A C G T G T C A
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

RUNX3/MA0684.1/Jaspar

Match Rank:6
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-GTGTGGTTTA
TTTGCGGTTT-
 A C G T A C T G C G A T A C T G C A G T C A T G A C T G A G C T C A G T A C G T G T C A
C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:7
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:GTGTGGTTTA
TTGCGGTTT-
 A C T G C G A T A C T G C A G T C A T G A C T G A G C T C A G T A C G T G T C A
A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:8
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:GTGTGGTTTA--
-TGTGGATTNNN
 A C T G C G A T A C T G C A G T C A T G A C T G A G C T C A G T A C G T G T C A A C G T A C G T
A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GTGTGGTTTA-
NNTGTGGATTSS
 A C G T A C T G C G A T A C T G C A G T C A T G A C T G A G C T C A G T A C G T G T C A A C G T
C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G

Gfi1b/MA0483.1/Jaspar

Match Rank:10
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GTGTGGTTTA
TGCTGTGATTT-
 A C G T A C G T A C T G C G A T A C T G C A G T C A T G A C T G A G C T C A G T A C G T G T C A
C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T A C G T