Information for 17-ATCTTTAAAA (Motif 15)

T C G A G A C T A G T C C G A T A C G T A C G T G C T A T C G A C G T A C T G A
Reverse Opposite:
G A C T G C A T A C G T C A G T T C G A G T C A C G T A A C T G C T G A A G C T
p-value:1e-32
log p-value:-7.529e+01
Information Content per bp:1.710
Number of Target Sequences with motif41.0
Percentage of Target Sequences with motif6.25%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.49%
Average Position of motif in Targets52.1 +/- 26.5bp
Average Position of motif in Background74.6 +/- 16.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXC10/MA0905.1/Jaspar

Match Rank:1
Score:0.70
Offset:0
Orientation:forward strand
Alignment:ATCTTTAAAA
GTCGTAAAAT
 T C G A G A C T A G T C C G A T A C G T A C G T G C T A T C G A C G T A C T G A
T C A G G A C T G T A C C T A G C G A T G C T A C G T A C G T A G C T A G C A T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:2
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:ATCTTTAAAA---
---TTTGAAACCG
 T C G A G A C T A G T C C G A T A C G T A C G T G C T A T C G A C G T A C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

LIN54/MA0619.1/Jaspar

Match Rank:3
Score:0.69
Offset:2
Orientation:forward strand
Alignment:ATCTTTAAAA-
--ATTTGAATT
 T C G A G A C T A G T C C G A T A C G T A C G T G C T A T C G A C G T A C T G A A C G T
A C G T A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T

TATA-Box(TBP)/Promoter/Homer

Match Rank:4
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:ATCTTTAAAA--
GNCTATAAAAGG
 T C G A G A C T A G T C C G A T A C G T A C G T G C T A T C G A C G T A C T G A A C G T A C G T
A T C G A T C G A T G C A G C T G C T A A C G T C G T A C G T A C T G A C T G A C T A G T A C G

HOXD11/MA0908.1/Jaspar

Match Rank:5
Score:0.68
Offset:0
Orientation:forward strand
Alignment:ATCTTTAAAA
GTCGTAAAAA
 T C G A G A C T A G T C C G A T A C G T A C G T G C T A T C G A C G T A C T G A
T C A G A C G T G A T C C T A G C G A T C G T A C G T A G C T A G C T A G C T A

Hoxa11/MA0911.1/Jaspar

Match Rank:6
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-ATCTTTAAAA-
GGTCGTAAAATT
 A C G T T C G A G A C T A G T C C G A T A C G T A C G T G C T A T C G A C G T A C T G A A C G T
C T A G T C A G A G C T G A T C C T A G C G A T C G T A C G T A G C T A G C T A G C A T C G A T

HOXC11/MA0651.1/Jaspar

Match Rank:7
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-ATCTTTAAAA
GGTCGTAAAAT
 A C G T T C G A G A C T A G T C C G A T A C G T A C G T G C T A T C G A C G T A C T G A
C T A G T C A G G A C T G A T C C T A G C G A T C G T A C G T A G T C A G C T A G C A T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:ATCTTTAAAA-
-CCTTTGATGT
 T C G A G A C T A G T C C G A T A C G T A C G T G C T A T C G A C G T A C T G A A C G T
A C G T A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T

HOXD12/MA0873.1/Jaspar

Match Rank:9
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-ATCTTTAAAA
AGTCGTAAAAA
 A C G T T C G A G A C T A G T C C G A T A C G T A C G T G C T A T C G A C G T A C T G A
T C G A T C A G A G C T T A G C T C A G G A C T C G T A C T G A C G T A G C T A G T C A

TCF7L2/MA0523.1/Jaspar

Match Rank:10
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-ATCTTTAAAA---
TNCCTTTGATCTTN
 A C G T T C G A G A C T A G T C C G A T A C G T A C G T G C T A T C G A C G T A C T G A A C G T A C G T A C G T
C A G T A G C T A G T C A G T C A G C T A G C T A C G T A T C G C G T A C G A T T A G C G A C T A G C T G A C T