Information for 16-AAGCGTCTGA (Motif 13)

G C T A C G T A T A C G G T A C C A T G A C G T A G T C C G A T A C T G C T G A
Reverse Opposite:
A G C T A G T C C G T A A C T G C G T A G T A C C A T G A G T C G A C T C G A T
p-value:1e-37
log p-value:-8.553e+01
Information Content per bp:1.757
Number of Target Sequences with motif36.0
Percentage of Target Sequences with motif5.49%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.40%
Average Position of motif in Targets38.2 +/- 29.3bp
Average Position of motif in Background63.9 +/- 15.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AAGCGTCTGA
VBSYGTCTGG
 G C T A C G T A T A C G G T A C C A T G A C G T A G T C C G A T A C T G C T G A
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.63
Offset:2
Orientation:forward strand
Alignment:AAGCGTCTGA
--CTGTCTGG
 G C T A C G T A T A C G G T A C C A T G A C G T A G T C C G A T A C T G C T G A
A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G

PB0060.1_Smad3_1/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--AAGCGTCTGA-----
NNTNNTGTCTGGNNTNG
 A C G T A C G T G C T A C G T A T A C G G T A C C A T G A C G T A G T C C G A T A C T G C T G A A C G T A C G T A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

POL002.1_INR/Jaspar

Match Rank:4
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:AAGCGTCTGA
--NNNANTGA
 G C T A C G T A T A C G G T A C C A T G A C G T A G T C C G A T A C T G C T G A
A C G T A C G T T C G A T C G A C T A G C T G A T A G C C G A T A C T G G T C A

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:5
Score:0.60
Offset:3
Orientation:forward strand
Alignment:AAGCGTCTGA---
---GGTCTGGCAT
 G C T A C G T A T A C G G T A C C A T G A C G T A G T C C G A T A C T G C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:6
Score:0.59
Offset:2
Orientation:forward strand
Alignment:AAGCGTCTGA
--TWGTCTGV
 G C T A C G T A T A C G G T A C C A T G A C G T A G T C C G A T A C T G C T G A
A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:7
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---AAGCGTCTGA----
CCNNACCATCTGGCCTN
 A C G T A C G T A C G T G C T A C G T A T A C G G T A C C A T G A C G T A G T C C G A T A C T G C T G A A C G T A C G T A C G T A C G T
A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T

ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AAGCGTCTGA-
-AACATCTGGA
 G C T A C G T A T A C G G T A C C A T G A C G T A G T C C G A T A C T G C T G A A C G T
A C G T T G C A C T G A A T G C G T C A A C G T A T G C A C G T A C T G A C T G T G C A

Nr2e3/MA0164.1/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AAGCGTCTGA
CAAGCTT----
 A C G T G C T A C G T A T A C G G T A C C A T G A C G T A G T C C G A T A C T G C T G A
G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:10
Score:0.56
Offset:1
Orientation:forward strand
Alignment:AAGCGTCTGA-
-ACCATCTGTT
 G C T A C G T A T A C G G T A C C A T G A C G T A G T C C G A T A C T G C T G A A C G T
A C G T T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T