Information for 15-TCTGCGTTGA (Motif 12)

A G C T A T G C C G A T A C T G G T A C A C T G C A G T C G A T T A C G G C T A
Reverse Opposite:
C G A T A T G C C G T A G C T A T G A C A C T G G T A C C G T A T A C G C T G A
p-value:1e-38
log p-value:-8.885e+01
Information Content per bp:1.691
Number of Target Sequences with motif37.0
Percentage of Target Sequences with motif5.64%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.37%
Average Position of motif in Targets44.5 +/- 24.8bp
Average Position of motif in Background60.5 +/- 14.6bp
Strand Bias (log2 ratio + to - strand density)-1.2
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TCTGCGTTGA
GGTCTGGCAT--
 A C G T A C G T A G C T A T G C C G A T A C T G G T A C A C T G C A G T C G A T T A C G G C T A
A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----TCTGCGTTGA
VBSYGTCTGG-----
 A C G T A C G T A C G T A C G T A C G T A G C T A T G C C G A T A C T G G T A C A C T G C A G T C G A T T A C G G C T A
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T

SREBF2/MA0596.1/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TCTGCGTTGA-
-ATGGGGTGAT
 A G C T A T G C C G A T A C T G G T A C A C T G C A G T C G A T T A C G G C T A A C G T
A C G T T C G A A C G T A T C G C T A G A T C G T A C G A C G T A C T G C G T A A G C T

SREBF1/MA0595.1/Jaspar

Match Rank:4
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TCTGCGTTGA-
-GTGGGGTGAT
 A G C T A T G C C G A T A C T G G T A C A C T G C A G T C G A T T A C G G C T A A C G T
A C G T T C A G A C G T A T C G C T A G A T C G A T C G A C G T A C T G C G T A A G C T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---TCTGCGTTGA
CTGTCTGG-----
 A C G T A C G T A C G T A G C T A T G C C G A T A C T G G T A C A C T G C A G T C G A T T A C G G C T A
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:6
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TCTGCGTTGA-
TGTGGATTNNN
 A G C T A T G C C G A T A C T G G T A C A C T G C A G T C G A T T A C G G C T A A C G T
C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:forward strand
Alignment:TCTGCGTTGA
GCTGTG----
 A G C T A T G C C G A T A C T G G T A C A C T G C A G T C G A T T A C G G C T A
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:8
Score:0.55
Offset:-7
Orientation:reverse strand
Alignment:-------TCTGCGTTGA
NNTNNTGTCTGGNNTNG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A T G C C G A T A C T G G T A C A C T G C A G T C G A T T A C G G C T A
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:9
Score:0.54
Offset:-8
Orientation:reverse strand
Alignment:--------TCTGCGTTGA
CCNNACCATCTGGCCTN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A T G C C G A T A C T G G T A C A C T G C A G T C G A T T A C G G C T A
A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:TCTGCGTTGA---
---CCTTTGATGT
 A G C T A T G C C G A T A C T G G T A C A C T G C A G T C G A T T A C G G C T A A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T