Information for 7-GGRAATGTCCCCAGCC (Motif 9)

C T A G A C T G T C G A C T G A C T G A A G C T A C T G G A C T A T G C A G T C A G T C A G T C T G C A A C T G A T G C A G T C
Reverse Opposite:
C T A G A T C G G T A C A C G T C T A G A C T G T C A G A T C G C T G A G T A C T C G A A G C T A G C T A G C T A G T C A G T C
p-value:1e-11
log p-value:-2.709e+01
Information Content per bp:1.753
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.01%
Number of Background Sequences with motif8.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets56.2 +/- 22.3bp
Average Position of motif in Background48.2 +/- 24.4bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:1
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GGRAATGTCCCCAGCC
GGGAATTTCC------
 C T A G A C T G T C G A C T G A C T G A A G C T A C T G G A C T A T G C A G T C A G T C A G T C T G C A A C T G A T G C A G T C
A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C A C G T A C G T A C G T A C G T A C G T A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:2
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GGRAATGTCCCCAGCC
GGGAAATCCCCN----
 C T A G A C T G T C G A C T G A C T G A A G C T A C T G G A C T A T G C A G T C A G T C A G T C T G C A A C T G A T G C A G T C
C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T A C G T A C G T A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:3
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GGRAATGTCCCCAGCC
GGGAATTTCC------
 C T A G A C T G T C G A C T G A C T G A A G C T A C T G G A C T A T G C A G T C A G T C A G T C T G C A A C T G A T G C A G T C
A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T

MZF1/MA0056.1/Jaspar

Match Rank:4
Score:0.63
Offset:7
Orientation:reverse strand
Alignment:GGRAATGTCCCCAGCC
-------TCCCCA---
 C T A G A C T G T C G A C T G A C T G A A G C T A C T G G A C T A T G C A G T C A G T C A G T C T G C A A C T G A T G C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C G T A C A G T C G T A C T C G A A C G T A C G T A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:5
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GGRAATGTCCCCAGCC
GGGGATTCCCCC----
 C T A G A C T G T C G A C T G A C T G A A G C T A C T G G A C T A T G C A G T C A G T C A G T C T G C A A C T G A T G C A G T C
A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C A C G T A C G T A C G T A C G T

NFKB2/MA0778.1/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GGRAATGTCCCCAGCC
AGGGGATTCCCCT----
 A C G T C T A G A C T G T C G A C T G A C T G A A G C T A C T G G A C T A T G C A G T C A G T C A G T C T G C A A C T G A T G C A G T C
T G C A T C A G A C T G C A T G C T A G T G C A G C A T G A C T G A T C G T A C G A T C G A T C A G C T A C G T A C G T A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GGRAATGTCCCCAGCC
GGGGATTTCC------
 C T A G A C T G T C G A C T G A C T G A A G C T A C T G G A C T A T G C A G T C A G T C A G T C T G C A A C T G A T G C A G T C
A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C A C G T A C G T A C G T A C G T A C G T A C G T

REL/MA0101.1/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GGRAATGTCCCCAGCC
-GGAAANCCCC-----
 C T A G A C T G T C G A C T G A C T G A A G C T A C T G G A C T A T G C A G T C A G T C A G T C T G C A A C T G A T G C A G T C
A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C A C G T A C G T A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.57
Offset:7
Orientation:reverse strand
Alignment:GGRAATGTCCCCAGCC-
-------TGCCCAGNHW
 C T A G A C T G T C G A C T G A C T G A A G C T A C T G G A C T A T G C A G T C A G T C A G T C T G C A A C T G A T G C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

INSM1/MA0155.1/Jaspar

Match Rank:10
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:GGRAATGTCCCCAGCC-
-----CGCCCCCTGACA
 C T A G A C T G T C G A C T G A C T G A A G C T A C T G G A C T A T G C A G T C A G T C A G T C T G C A A C T G A T G C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T G A T C C T A G T G A C A G T C A G T C A T G C A G T C C G A T C A T G T C G A G T A C G T C A