Information for 12-TGTCCCCATTCMGKTG (Motif 18)

A C G T A C T G A C G T A G T C A G T C A G T C G T A C T C G A A G C T A C G T A T G C G T C A A T C G A C T G A C G T A C T G
Reverse Opposite:
G T A C C G T A T G A C A T G C C A G T A T C G G T C A T C G A A G C T A C T G A C T G A C T G A C T G G T C A T A G C C G T A
p-value:1e-10
log p-value:-2.307e+01
Information Content per bp:1.749
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif5.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.5 +/- 18.7bp
Average Position of motif in Background51.3 +/- 15.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MZF1/MA0056.1/Jaspar

Match Rank:1
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:TGTCCCCATTCMGKTG
--TCCCCA--------
 A C G T A C T G A C G T A G T C A G T C A G T C G T A C T C G A A G C T A C G T A T G C G T C A A T C G A C T G A C G T A C T G
A C G T A C G T A G C T A G T C G T A C A G T C G T A C T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0107.1_Ascl2_2/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TGTCCCCATTCMGKTG
CTATCCCCGCCCTATT-
 A C G T A C G T A C T G A C G T A G T C A G T C A G T C G T A C T C G A A G C T A C G T A T G C G T C A A T C G A C T G A C G T A C T G
A T G C G A C T T G C A C G A T G T A C T A G C G T A C T G A C C T A G A G T C G A T C G A T C A G C T C T G A A C G T G A C T A C G T

PB0157.1_Rara_2/Jaspar

Match Rank:3
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----TGTCCCCATTCMGKTG
NNCNTGACCCCGCTCT----
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C A G T C A G T C G T A C T C G A A G C T A C G T A T G C G T C A A T C G A C T G A C G T A C T G
A C G T T G C A T G A C C A G T G A C T T C A G C G T A G T A C G T A C A T G C T A G C T C A G G T A C C A G T G T A C C A G T A C G T A C G T A C G T A C G T

PB0057.1_Rxra_1/Jaspar

Match Rank:4
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----TGTCCCCATTCMGKTG
TGTCGTGACCCCTTAAT----
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C A G T C A G T C G T A C T C G A A G C T A C G T A T G C G T C A A T C G A C T G A C G T A C T G
C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T A C G T A C G T A C G T A C G T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:5
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----TGTCCCCATTCMGKTG
NNNNTGACCCGGCGCG----
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C A G T C A G T C G T A C T C G A A G C T A C G T A T G C G T C A A T C G A C T G A C G T A C T G
C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G A C G T A C G T A C G T A C G T

PB0030.1_Hnf4a_1/Jaspar

Match Rank:6
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----TGTCCCCATTCMGKTG
NNANTTGACCCCTNNNN----
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C A G T C A G T C G T A C T C G A A G C T A C G T A T G C G T C A A T C G A C T G A C G T A C T G
A C G T G T A C C G T A T C G A A C G T A C G T C T A G G T C A G T A C G T A C A G T C A G T C C A G T A C T G T C A G G T C A T A C G A C G T A C G T A C G T A C G T

PB0118.1_Esrra_2/Jaspar

Match Rank:7
Score:0.53
Offset:-5
Orientation:reverse strand
Alignment:-----TGTCCCCATTCMGKTG
NNNNTTGACCCCTNNNN----
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C A G T C A G T C G T A C T C G A A G C T A C G T A T G C G T C A A T C G A C T G A C G T A C T G
C A T G T A G C T A G C G A T C C G A T A G C T T C A G G C T A G T A C G A T C A G T C A G T C C G A T T G A C T A C G G T A C A T G C A C G T A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:8
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-TGTCCCCATTCMGKTG
CTGTTCCTGG-------
 A C G T A C G T A C T G A C G T A G T C A G T C A G T C G T A C T C G A A G C T A C G T A T G C G T C A A T C G A C T G A C G T A C T G
T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:9
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:TGTCCCCATTCMGKTG
TGACCTYA--------
 A C G T A C T G A C G T A G T C A G T C A G T C G T A C T C G A A G C T A C G T A T G C G T C A A T C G A C T G A C G T A C T G
A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0204.1_Zfp740_2/Jaspar

Match Rank:10
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--TGTCCCCATTCMGKTG
AAATTCCCCCCGGAAGT-
 A C G T A C G T A C G T A C T G A C G T A G T C A G T C A G T C G T A C T C G A A G C T A C G T A T G C G T C A A T C G A C T G A C G T A C T G
C T G A C T G A C T G A C A G T G C A T G A T C G A T C A G T C A G T C A T G C A T G C T A C G A T C G C T G A C T G A T C A G A G C T A C G T