Information for 4-AGGAAAAGCAGCT (Motif 5)

T G C A C A T G T C A G T G C A T C G A T C G A G T C A C T A G A T G C G C T A A C T G A T G C A C G T
Reverse Opposite:
G T C A A T C G A G T C C G A T A T C G A G T C A C G T A C G T A G C T A C G T A G T C G A T C A C G T
p-value:1e-15
log p-value:-3.512e+01
Information Content per bp:1.751
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.20%
Number of Background Sequences with motif40.4
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets50.3 +/- 24.6bp
Average Position of motif in Background49.9 +/- 29.5bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:1
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:AGGAAAAGCAGCT---
----NNAGCAGCTGCT
 T G C A C A T G T C A G T G C A T C G A T C G A G T C A C T A G A T G C G C T A A C T G A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T

Ascl2/MA0816.1/Jaspar

Match Rank:2
Score:0.63
Offset:6
Orientation:forward strand
Alignment:AGGAAAAGCAGCT---
------AGCAGCTGCT
 T G C A C A T G T C A G T G C A T C G A T C G A G T C A C T A G A T G C G C T A A C T G A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:AGGAAAAGCAGCT--
-----CAGCAGCTGN
 T G C A C A T G T C A G T G C A T C G A T C G A G T C A C T A G A T G C G C T A A C T G A T G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:4
Score:0.62
Offset:6
Orientation:forward strand
Alignment:AGGAAAAGCAGCT-
------ANCAGCTG
 T G C A C A T G T C A G T G C A T C G A T C G A G T C A C T A G A T G C G C T A A C T G A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:5
Score:0.61
Offset:6
Orientation:forward strand
Alignment:AGGAAAAGCAGCT-
------AACAGCTG
 T G C A C A T G T C A G T G C A T C G A T C G A G T C A C T A G A T G C G C T A A C T G A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:6
Score:0.61
Offset:5
Orientation:forward strand
Alignment:AGGAAAAGCAGCT--
-----NAHCAGCTGD
 T G C A C A T G T C A G T G C A T C G A T C G A G T C A C T A G A T G C G C T A A C T G A T G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T

Myod1/MA0499.1/Jaspar

Match Rank:7
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:AGGAAAAGCAGCT---
---NGNGACAGCTGCN
 T G C A C A T G T C A G T G C A T C G A T C G A G T C A C T A G A T G C G C T A A C T G A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:8
Score:0.60
Offset:5
Orientation:forward strand
Alignment:AGGAAAAGCAGCT--
-----NAACAGCTGG
 T G C A C A T G T C A G T G C A T C G A T C G A G T C A C T A G A T G C G C T A A C T G A T G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G

NFATC2/MA0152.1/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AGGAAAAGCAGCT
TGGAAAA------
 T G C A C A T G T C A G T G C A T C G A T C G A G T C A C T A G A T G C G C T A A C T G A T G C A C G T
C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T A C G T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:10
Score:0.60
Offset:6
Orientation:forward strand
Alignment:AGGAAAAGCAGCT----
------GACAGCTGCAG
 T G C A C A T G T C A G T G C A T C G A T C G A G T C A C T A G A T G C G C T A A C T G A T G C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G