Information for 20-AGGACTTGTG (Motif 28)

C G T A A C T G A C T G C G T A A G T C A C G T A C G T A C T G A C G T A C T G
Reverse Opposite:
A G T C C G T A G T A C C G T A C G T A A C T G A C G T A G T C A G T C A C G T
p-value:1e-7
log p-value:-1.740e+01
Information Content per bp:1.964
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.49%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets63.5 +/- 17.8bp
Average Position of motif in Background61.5 +/- 23.2bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0134.1_Hnf4a_2/Jaspar

Match Rank:1
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----AGGACTTGTG--
NNATTGGACTTTNGNN
 A C G T A C G T A C G T A C G T C G T A A C T G A C T G C G T A A G T C A C G T A C G T A C T G A C G T A C T G A C G T A C G T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AGGACTTGTG
AGGCCTNG--
 C G T A A C T G A C T G C G T A A G T C A C G T A C G T A C T G A C G T A C T G
C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:3
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AGGACTTGTG
TTGACTTTT-
 C G T A A C T G A C T G C G T A A G T C A C G T A C G T A C T G A C G T A C T G
C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:4
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AGGACTTGTG
AGGCCTAG--
 C G T A A C T G A C T G C G T A A G T C A C G T A C G T A C T G A C G T A C T G
T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T

PH0112.1_Nkx2-3/Jaspar

Match Rank:5
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----AGGACTTGTG-
CNTTAAGTACTTAANG
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C T G C G T A A G T C A C G T A C G T A C T G A C G T A C T G A C G T
G A T C C G T A G A C T A G C T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T C G T A T C G A T C G A C T A G

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:6
Score:0.55
Offset:2
Orientation:forward strand
Alignment:AGGACTTGTG--
--RTCATGTGAC
 C G T A A C T G A C T G C G T A A G T C A C G T A C G T A C T G A C G T A C T G A C G T A C G T
A C G T A C G T T C A G A G C T A T G C C G T A A G C T T C A G C A G T A C T G C T G A A G T C

PB0175.1_Sox4_2/Jaspar

Match Rank:7
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--AGGACTTGTG-----
GGAAAAATTGTTAGGAA
 A C G T A C G T C G T A A C T G A C T G C G T A A G T C A C G T A C G T A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T
T A C G T C A G G C T A C G T A C T G A C T G A C T G A A G C T C G A T T C A G C G A T G A C T C T G A T A C G C T A G C T G A C T G A

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--AGGACTTGTG
AGAGGAAGTG--
 A C G T A C G T C G T A A C T G A C T G C G T A A G T C A C G T A C G T A C T G A C G T A C T G
C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G A C G T A C G T

GFY(?)/Promoter/Homer

Match Rank:9
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:AGGACTTGTG--
GGGAATTGTAGT
 C G T A A C T G A C T G C G T A A G T C A C G T A C G T A C T G A C G T A C T G A C G T A C G T
C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T

PH0116.1_Nkx2-9/Jaspar

Match Rank:10
Score:0.54
Offset:-6
Orientation:reverse strand
Alignment:------AGGACTTGTG-
NATTTAAGTACTTNAAA
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C T G C G T A A G T C A C G T A C G T A C T G A C G T A C T G A C G T
C T G A G C T A C G A T G C A T A G C T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T G C T A C G T A C T G A G C T A