Information for 12-SACCYMTYAAAGS (Motif 14)

A T C G C G T A A G T C A G T C A G C T G T A C A C G T A G T C C G T A C T G A C T G A A C T G A T G C
Reverse Opposite:
T A C G A G T C A G C T A G C T A C G T T C A G C G T A A C T G C T G A A C T G A C T G A C G T A T G C
p-value:1e-10
log p-value:-2.378e+01
Information Content per bp:1.819
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets57.2 +/- 25.7bp
Average Position of motif in Background48.2 +/- 6.5bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TATA-Box(TBP)/Promoter/Homer

Match Rank:1
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:SACCYMTYAAAGS
-GNCTATAAAAGG
 A T C G C G T A A G T C A G T C A G C T G T A C A C G T A G T C C G T A C T G A C T G A A C T G A T G C
A C G T A T C G A T C G A T G C A G C T G C T A A C G T C G T A C G T A C T G A C T G A C T A G T A C G

PH0140.1_Pknox1/Jaspar

Match Rank:2
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---SACCYMTYAAAGS
AAAGACCTGTCAATCC
 A C G T A C G T A C G T A T C G C G T A A G T C A G T C A G C T G T A C A C G T A G T C C G T A C T G A C T G A A C T G A T G C
C G T A C T G A T G C A A T C G C T G A A T G C T G A C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G A C T G A C

PH0104.1_Meis2/Jaspar

Match Rank:3
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---SACCYMTYAAAGS
AAAGACCTGTCAATAC
 A C G T A C G T A C G T A T C G C G T A A G T C A G T C A G C T G T A C A C G T A G T C C G T A C T G A C T G A A C T G A T G C
G C T A C G T A T C A G A T C G C T G A A T G C G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T G T C A A G T C

PH0102.1_Meis1/Jaspar

Match Rank:4
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---SACCYMTYAAAGS
AACGAGCTGTCAATAC
 A C G T A C G T A C G T A T C G C G T A A G T C A G T C A G C T G T A C A C G T A G T C C G T A C T G A C T G A A C T G A T G C
C G T A C G T A T A C G A T C G C T G A A T C G T G A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A G A T C

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.62
Offset:3
Orientation:forward strand
Alignment:SACCYMTYAAAGS
---ACATCAAAGG
 A T C G C G T A A G T C A G T C A G C T G T A C A C G T A G T C C G T A C T G A C T G A A C T G A T G C
A C G T A C G T A C G T C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G

Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer

Match Rank:6
Score:0.61
Offset:1
Orientation:forward strand
Alignment:SACCYMTYAAAGS
-NGCAATTAAA--
 A T C G C G T A A G T C A G T C A G C T G T A C A C G T A G T C C G T A C T G A C T G A A C T G A T G C
A C G T T A C G A T C G G A T C G T C A C T G A G C A T C G A T G C T A T C G A G C T A A C G T A C G T

PB0040.1_Lef1_1/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:SACCYMTYAAAGS----
NANAGATCAAAGGGNNN
 A T C G C G T A A G T C A G T C A G C T G T A C A C G T A G T C C G T A C T G A C T G A A C T G A T G C A C G T A C G T A C G T A C G T
A C T G G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C A G G C T A G A C T G A C T

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:8
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:SACCYMTYAAAGS----
NNNAGATCAAAGGANNN
 A T C G C G T A A G T C A G T C A G C T G T A C A C G T A G T C C G T A C T G A C T G A A C T G A T G C A C G T A C G T A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T

TCF7L2/MA0523.1/Jaspar

Match Rank:9
Score:0.60
Offset:1
Orientation:forward strand
Alignment:SACCYMTYAAAGS--
-AAAGATCAAAGGAA
 A T C G C G T A A G T C A G T C A G C T G T A C A C G T A G T C C G T A C T G A C T G A A C T G A T G C A C G T A C G T
A C G T C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:10
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:SACCYMTYAAAGS
-CCYMATAAAA--
 A T C G C G T A A G T C A G T C A G C T G T A C A C G T A G T C C G T A C T G A C T G A A C T G A T G C
A C G T T G A C A T G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A A C G T A C G T