Information for 11-YCWCMGCCACAAS (Motif 13)

A G C T A G T C C G T A A G T C G T C A A C T G A G T C A G T C C G T A A G T C G T C A C T G A A T G C
Reverse Opposite:
A T C G A G C T A C G T A C T G A C G T C T A G A C T G A G T C A C G T A C T G C G A T A C T G C T G A
p-value:1e-10
log p-value:-2.378e+01
Information Content per bp:1.869
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.5 +/- 28.9bp
Average Position of motif in Background36.3 +/- 7.4bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:1
Score:0.64
Offset:2
Orientation:forward strand
Alignment:YCWCMGCCACAAS-
--NWAACCACADNN
 A G C T A G T C C G T A A G T C G T C A A C T G A G T C A G T C C G T A A G T C G T C A C T G A A T G C A C G T
A C G T A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

RUNX1/MA0002.2/Jaspar

Match Rank:2
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:YCWCMGCCACAAS-
---AAACCACAGAN
 A G C T A G T C C G T A A G T C G T C A A C T G A G T C A G T C C G T A A G T C G T C A C T G A A T G C A C G T
A C G T A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:3
Score:0.61
Offset:3
Orientation:forward strand
Alignment:YCWCMGCCACAAS
---AAACCACANN
 A G C T A G T C C G T A A G T C G T C A A C T G A G T C A G T C C G T A A G T C G T C A C T G A A T G C
A C G T A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer

Match Rank:4
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-YCWCMGCCACAAS
GCCACRCCCACY--
 A C G T A G C T A G T C C G T A A G T C G T C A A C T G A G T C A G T C C G T A A G T C G T C A C T G A A T G C
T C A G T G A C G T A C T G C A G T A C C T A G G T A C A T G C A G T C G T C A A G T C G A C T A C G T A C G T

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.58
Offset:5
Orientation:forward strand
Alignment:YCWCMGCCACAAS--
-----GCCACACCCA
 A G C T A G T C C G T A A G T C G T C A A C T G A G T C A G T C C G T A A G T C G T C A C T G A A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G G T A C A G T C T G C A A G T C C T G A A G T C A G T C A G T C G C T A

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:YCWCMGCCACAAS
---AAACCACAGC
 A G C T A G T C C G T A A G T C G T C A A C T G A G T C A G T C C G T A A G T C G T C A C T G A A T G C
A C G T A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

PB0202.1_Zfp410_2/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--YCWCMGCCACAAS--
TCACCCCGCCCCAAATT
 A C G T A C G T A G C T A G T C C G T A A G T C G T C A A C T G A G T C A G T C C G T A A G T C G T C A C T G A A T G C A C G T A C G T
A G C T G A T C G T C A A G T C G A T C A G T C A G T C A C T G T G A C A G T C T G A C A T G C C G A T G C T A G T C A G A C T G C A T

ZNF354C/MA0130.1/Jaspar

Match Rank:8
Score:0.56
Offset:4
Orientation:forward strand
Alignment:YCWCMGCCACAAS
----ATCCAC---
 A G C T A G T C C G T A A G T C G T C A A C T G A G T C A G T C C G T A A G T C G T C A C T G A A T G C
A C G T A C G T A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:YCWCMGCCACAAS
SCCTAGCAACAG-
 A G C T A G T C C G T A A G T C G T C A A C T G A G T C A G T C C G T A A G T C G T C A C T G A A T G C
A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G A C G T

Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer

Match Rank:10
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--YCWCMGCCACAAS
CCCCTCCCCCAC---
 A C G T A C G T A G C T A G T C C G T A A G T C G T C A A C T G A G T C A G T C C G T A A G T C G T C A C T G A A T G C
T A G C G T A C A G T C G T A C C G A T A G T C A G T C A G T C A G T C A G T C C G T A G A T C A C G T A C G T A C G T