Information for 15-TCATAGGGCA (Motif 53)

A C G T A G T C C G T A A C G T C G T A A C T G A C T G A C T G A T G C C G T A
Reverse Opposite:
A C G T A T C G A G T C A G T C A G T C A C G T C G T A A C G T A C T G C G T A
p-value:1e-3
log p-value:-7.029e+00
Information Content per bp:1.959
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.29%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.5 +/- 27.7bp
Average Position of motif in Background33.1 +/- 5.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0128.1_Gcm1_2/Jaspar

Match Rank:1
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---TCATAGGGCA----
TGCGCATAGGGGAGGAG
 A C G T A C G T A C G T A C G T A G T C C G T A A C G T C G T A A C T G A C T G A C T G A T G C C G T A A C G T A C G T A C G T A C G T
C G A T C A T G A T G C T A C G G T A C T C G A A G C T T C G A C A T G A C T G A C T G A C T G T C G A A T C G T C A G G T C A A C T G

PB0133.1_Hic1_2/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TCATAGGGCA-----
NNNNTTGGGCACNNCN
 A C G T A C G T A G T C C G T A A C G T C G T A A C T G A C T G A C T G A T G C C G T A A C G T A C G T A C G T A C G T A C G T
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.66
Offset:1
Orientation:forward strand
Alignment:TCATAGGGCA-
-CAAAGGTCAG
 A C G T A G T C C G T A A C G T C G T A A C T G A C T G A C T G A T G C C G T A A C G T
A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:4
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----TCATAGGGCA
GAGGTCAAAGGTCA
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T C G T A A C T G A C T G A C T G A T G C C G T A
T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A

Nr2f6/MA0677.1/Jaspar

Match Rank:5
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----TCATAGGGCA
GAGGTCAAAGGTCA
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T C G T A A C T G A C T G A C T G A T G C C G T A
T C A G T C G A C A T G C A T G A C G T A G T C C G T A C T G A T C G A A C T G C A T G A C G T A G T C C T G A

NR2C2/MA0504.1/Jaspar

Match Rank:6
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----TCATAGGGCA
AGGGGTCAGAGGTCA
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T C G T A A C T G A C T G A C T G A T G C C G T A
T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A

Rxra/MA0512.2/Jaspar

Match Rank:7
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----TCATAGGGCA
GGGGTCAAAGGTCA
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T C G T A A C T G A C T G A C T G A T G C C G T A
T C A G T C A G C A T G C A T G A C G T A G T C T C G A C T G A T C G A A T C G A C T G A C G T A G T C T C G A

RXRG/MA0856.1/Jaspar

Match Rank:8
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----TCATAGGGCA
GGGGTCAAAGGTCA
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T C G T A A C T G A C T G A C T G A T G C C G T A
T C A G T C A G C A T G C A T G A C G T A G T C C T G A C T G A C T G A C A T G C A T G A C G T A G T C T C G A

RXRB/MA0855.1/Jaspar

Match Rank:9
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----TCATAGGGCA
GGGGTCAAAGGTCA
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T C G T A A C T G A C T G A C T G A T G C C G T A
T C A G T C A G C T A G C A T G A C G T A G T C C T G A C T G A T C G A C A T G C A T G A C G T A G T C T C G A

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:10
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----TCATAGGGCA
GTAGGGCAAAGGTCA
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T C G T A A C T G A C T G A C T G A T G C C G T A
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A