Information for 19-GGTCSATACCCRG (Motif 49)

A C T G A C T G A C G T A T G C T A C G G T C A G A C T C G T A A G T C A T G C A G T C T C A G A C T G
Reverse Opposite:
T G A C A G T C A C T G A T C G C T A G C G A T C T G A A C G T A T G C A T C G C G T A A G T C A G T C
p-value:1e-5
log p-value:-1.230e+01
Information Content per bp:1.745
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.18%
Number of Background Sequences with motif63.2
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets51.9 +/- 23.0bp
Average Position of motif in Background44.9 +/- 24.5bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----GGTCSATACCCRG
GARTGGTCATCGCCC--
 A C G T A C G T A C G T A C G T A C T G A C T G A C G T A T G C T A C G G T C A G A C T C G T A A G T C A T G C A G T C T C A G A C T G
T A C G C G T A T C A G G A C T C T A G A C T G C A G T T A G C T C G A A C G T G T A C C T A G A G T C A G T C G A T C A C G T A C G T

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:2
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GGTCSATACCCRG
AGGTCTCTAACC--
 A C G T A C T G A C T G A C G T A T G C T A C G G T C A G A C T C G T A A G T C A T G C A G T C T C A G A C T G
C T G A T C A G A C T G C A G T A G T C G A C T A G T C A C G T C G T A G C T A A T G C G A T C A C G T A C G T

NFKB2/MA0778.1/Jaspar

Match Rank:3
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GGTCSATACCCRG
AGGGGAATCCCCT-
 A C G T A C T G A C T G A C G T A T G C T A C G G T C A G A C T C G T A A G T C A T G C A G T C T C A G A C T G
T C G A C T A G C A T G C A T G C T A G C T G A C G T A A C G T G A T C G T A C G T A C A G T C A C G T A C G T

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:4
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GGTCSATACCCRG
NAGGTCANTGACCT-
 A C G T A C G T A C T G A C T G A C G T A T G C T A C G G T C A G A C T C G T A A G T C A T G C A G T C T C A G A C T G
T C A G T C G A C T A G C A T G A C G T A T G C T C G A G A C T A G C T T A C G T G C A G T A C G T A C A G C T A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:5
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GGTCSATACCCRG
GGGGGAATCCCC-
 A C T G A C T G A C G T A T G C T A C G G T C A G A C T C G T A A G T C A T G C A G T C T C A G A C T G
T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GGTCSATACCCRG
NGGGGATTTCCC--
 A C G T A C T G A C T G A C G T A T G C T A C G G T C A G A C T C G T A A G T C A T G C A G T C T C A G A C T G
C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GGTCSATACCCRG
AGGTCA--------
 A C G T A C T G A C T G A C G T A T G C T A C G G T C A G A C T C G T A A G T C A T G C A G T C T C A G A C T G
C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0030.1_Hnf4a_1/Jaspar

Match Rank:8
Score:0.54
Offset:-7
Orientation:forward strand
Alignment:-------GGTCSATACCCRG
CTCCAGGGGTCAATTGA---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T A T G C T A C G G T C A G A C T C G T A A G T C A T G C A G T C T C A G A C T G
A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A A C G T A C G T A C G T

Hnf4a/MA0114.3/Jaspar

Match Rank:9
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--GGTCSATACCCRG-
GGGGTCAAAGTCCAAT
 A C G T A C G T A C T G A C T G A C G T A T G C T A C G G T C A G A C T C G T A A G T C A T G C A G T C T C A G A C T G A C G T
T C A G T C A G C T A G C A T G C A G T A G T C T C G A C T G A C T G A A C T G A C G T A G T C A G T C C T G A T C G A G A C T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:10
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:GGTCSATACCCRG
-GGCCACACCCAN
 A C T G A C T G A C G T A T G C T A C G G T C A G A C T C G T A A G T C A T G C A G T C T C A G A C T G
A C G T C T A G C T A G T G A C A G T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C T G