Information for 10-GACATTGTCT (Motif 45)

A C T G T C G A T G A C G T C A C G A T A C G T A C T G A C G T A T G C A G C T
Reverse Opposite:
T C G A T A C G T G C A G T A C G T C A G C T A C A G T A C T G A G C T T G A C
p-value:1e-5
log p-value:-1.274e+01
Information Content per bp:1.691
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif4.26%
Number of Background Sequences with motif763.5
Percentage of Background Sequences with motif1.60%
Average Position of motif in Targets50.3 +/- 24.1bp
Average Position of motif in Background51.2 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox17/MA0078.1/Jaspar

Match Rank:1
Score:0.74
Offset:0
Orientation:forward strand
Alignment:GACATTGTCT
CTCATTGTC-
 A C T G T C G A T G A C G T C A C G A T A C G T A C T G A C G T A T G C A G C T
G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:2
Score:0.71
Offset:-6
Orientation:reverse strand
Alignment:------GACATTGTCT-
NNNNATGACCTTGANTN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G T C G A T G A C G T C A C G A T A C G T A C T G A C G T A T G C A G C T A C G T
C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A

PB0168.1_Sox14_2/Jaspar

Match Rank:3
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--GACATTGTCT---
NNNCCATTGTGTNAN
 A C G T A C G T A C T G T C G A T G A C G T C A C G A T A C G T A C T G A C G T A T G C A G C T A C G T A C G T A C G T
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G

Sox6/MA0515.1/Jaspar

Match Rank:4
Score:0.69
Offset:1
Orientation:forward strand
Alignment:GACATTGTCT-
-CCATTGTTTT
 A C T G T C G A T G A C G T C A C G A T A C G T A C T G A C G T A T G C A G C T A C G T
A C G T A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T

SOX10/MA0442.1/Jaspar

Match Rank:5
Score:0.68
Offset:2
Orientation:forward strand
Alignment:GACATTGTCT
--CTTTGT--
 A C T G T C G A T G A C G T C A C G A T A C G T A C T G A C G T A T G C A G C T
A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:6
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GACATTGTCT
NCCATTGTTY
 A C T G T C G A T G A C G T C A C G A T A C G T A C T G A C G T A T G C A G C T
C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:7
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GACATTGTCT
TGACCTTGAV-
 A C G T A C T G T C G A T G A C G T C A C G A T A C G T A C T G A C G T A T G C A G C T
G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:8
Score:0.65
Offset:4
Orientation:forward strand
Alignment:GACATTGTCT--
----TWGTCTGV
 A C T G T C G A T G A C G T C A C G A T A C G T A C T G A C G T A T G C A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

SRY/MA0084.1/Jaspar

Match Rank:9
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:GACATTGTCT--
---ATTGTTTAN
 A C T G T C G A T G A C G T C A C G A T A C G T A C T G A C G T A T G C A G C T A C G T A C G T
A C G T A C G T A C G T G C T A A G C T A C G T C T A G C G A T C G A T G C A T G C T A G T A C

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:10
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GACATTGTCT-
-CCATTGTTYB
 A C T G T C G A T G A C G T C A C G A T A C G T A C T G A C G T A T G C A G C T A C G T
A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G