Information for 3-KGGARCAGGCTGGGMA (Motif 3)

A C T G C A T G A T C G C G T A C T G A A T G C C G T A A C T G C T A G G T A C A C G T A C T G A C T G C T A G T G C A G T C A
Reverse Opposite:
A C G T A C G T A G T C A G T C A G T C C G T A A C T G A G T C A G T C A C G T A T C G A G C T G A C T A T G C G T A C G T A C
p-value:1e-13
log p-value:-3.050e+01
Information Content per bp:1.754
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.91%
Number of Background Sequences with motif40.1
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets63.2 +/- 19.2bp
Average Position of motif in Background42.9 +/- 24.2bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.68
Offset:6
Orientation:forward strand
Alignment:KGGARCAGGCTGGGMA
------WDNCTGGGCA
 A C T G C A T G A T C G C G T A C T G A A T G C C G T A A C T G C T A G G T A C A C G T A C T G A C T G C T A G T G C A G T C A
A C G T A C G T A C G T A C G T A C G T A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A

PB0167.1_Sox13_2/Jaspar

Match Rank:2
Score:0.60
Offset:2
Orientation:forward strand
Alignment:KGGARCAGGCTGGGMA---
--GTATTGGGTGGGTAATT
 A C T G C A T G A T C G C G T A C T G A A T G C C G T A A C T G C T A G G T A C A C G T A C T G A C T G C T A G T G C A G T C A A C G T A C G T A C G T
A C G T A C G T C T A G C G A T C T G A G A C T A G C T C A T G C A T G C T A G G C A T A C T G C A T G C A T G C G A T G C T A G C A T G C A T C A G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.60
Offset:5
Orientation:forward strand
Alignment:KGGARCAGGCTGGGMA
-----TWGTCTGV---
 A C T G C A T G A T C G C G T A C T G A A T G C C G T A A C T G C T A G G T A C A C G T A C T G A C T G C T A G T G C A G T C A
A C G T A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T

SP2/MA0516.1/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:KGGARCAGGCTGGGMA
GGGNGGGGGCGGGGC-
 A C T G C A T G A T C G C G T A C T G A A T G C C G T A A C T G C T A G G T A C A C G T A C T G A C T G C T A G T G C A G T C A
T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C A C G T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:5
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:KGGARCAGGCTGGGMA--
---RGSMTBCTGGGAAAT
 A C T G C A T G A T C G C G T A C T G A A T G C C G T A A C T G C T A G G T A C A C G T A C T G A C T G C T A G T G C A G T C A A C G T A C G T
A C G T A C G T A C G T C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.55
Offset:7
Orientation:reverse strand
Alignment:KGGARCAGGCTGGGMA
-------NGCTN----
 A C T G C A T G A T C G C G T A C T G A A T G C C G T A A C T G C T A G G T A C A C G T A C T G A C T G C T A G T G C A G T C A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.55
Offset:5
Orientation:forward strand
Alignment:KGGARCAGGCTGGGMA
-----CTGTCTGG---
 A C T G C A T G A T C G C G T A C T G A A T G C C G T A A C T G C T A G G T A C A C G T A C T G A C T G C T A G T G C A G T C A
A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T

PB0107.1_Ascl2_2/Jaspar

Match Rank:8
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:KGGARCAGGCTGGGMA---
---NATNGGGNGGGGANAN
 A C T G C A T G A T C G C G T A C T G A A T G C C G T A A C T G C T A G G T A C A C G T A C T G A C T G C T A G T G C A G T C A A C G T A C G T A C G T
A C G T A C G T A C G T C T G A T G C A G A C T T C G A C T A G C T A G T C A G G A T C A C T G C A T G A T C G C A T G G C T A A C G T C T G A T A C G

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:9
Score:0.54
Offset:8
Orientation:reverse strand
Alignment:KGGARCAGGCTGGGMA--
--------CSTGGGAAAD
 A C T G C A T G A T C G C G T A C T G A A T G C C G T A A C T G C T A G G T A C A C G T A C T G A C T G C T A G T G C A G T C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:10
Score:0.54
Offset:0
Orientation:forward strand
Alignment:KGGARCAGGCTGGGMA
GGGGCTYGKCTGGGA-
 A C T G C A T G A T C G C G T A C T G A A T G C C G T A A C T G C T A G G T A C A C G T A C T G A C T G C T A G T G C A G T C A
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A A C G T