Information for 17-CGGAGAGSRYCACGSA (Motif 26)

A G T C A C T G A C T G C T G A A C T G C G T A A C T G A T C G C T A G A G C T A G T C C T G A A G T C A C T G A T G C C T G A
Reverse Opposite:
A G C T A T C G A G T C A C T G A G C T A C T G C T G A A G T C A T G C A G T C A C G T A G T C A G C T A G T C A G T C C T A G
p-value:1e-8
log p-value:-2.020e+01
Information Content per bp:1.866
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets66.5 +/- 8.7bp
Average Position of motif in Background64.5 +/- 7.5bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:1
Score:0.57
Offset:10
Orientation:reverse strand
Alignment:CGGAGAGSRYCACGSA
----------CACGCA
 A G T C A C T G A C T G C T G A A C T G C G T A A C T G A T C G C T A G A G C T A G T C C T G A A G T C A C T G A T G C C T G A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:2
Score:0.53
Offset:7
Orientation:forward strand
Alignment:CGGAGAGSRYCACGSA-
-------TBGCACGCAA
 A G T C A C T G A C T G C T G A A C T G C G T A A C T G A T C G C T A G A G C T A G T C C T G A A G T C A C T G A T G C C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A

Pax2/MA0067.1/Jaspar

Match Rank:3
Score:0.51
Offset:7
Orientation:forward strand
Alignment:CGGAGAGSRYCACGSA
-------AGTCACGC-
 A G T C A C T G A C T G C T G A A C T G C G T A A C T G A T C G C T A G A G C T A G T C C T G A A G T C A C T G A T G C C T G A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G A C G T

PB0140.1_Irf6_2/Jaspar

Match Rank:4
Score:0.50
Offset:-4
Orientation:reverse strand
Alignment:----CGGAGAGSRYCACGSA
NNNACCGAGAGTNNN-----
 A C G T A C G T A C G T A C G T A G T C A C T G A C T G C T G A A C T G C G T A A C T G A T C G C T A G A G C T A G T C C T G A A G T C A C T G A T G C C T G A
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:5
Score:0.49
Offset:6
Orientation:reverse strand
Alignment:CGGAGAGSRYCACGSA--
------GGACCACCCACG
 A G T C A C T G A C T G C T G A A C T G C G T A A C T G A T C G C T A G A G C T A G T C C T G A A G T C A C T G A T G C C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G

POL013.1_MED-1/Jaspar

Match Rank:6
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:CGGAGAGSRYCACGSA
CGGAGC----------
 A G T C A C T G A C T G C T G A A C T G C G T A A C T G A T C G C T A G A G C T A G T C C T G A A G T C A C T G A T G C C T G A
A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.48
Offset:0
Orientation:forward strand
Alignment:CGGAGAGSRYCACGSA
TGGGGAAGGGCM----
 A G T C A C T G A C T G C T G A A C T G C G T A A C T G A T C G C T A G A G C T A G T C C T G A A G T C A C T G A T G C C T G A
G A C T C T A G C T A G C T A G A C T G T C G A C T G A C T A G C T A G C T A G G T A C G T C A A C G T A C G T A C G T A C G T

PAX1/MA0779.1/Jaspar

Match Rank:8
Score:0.48
Offset:7
Orientation:forward strand
Alignment:CGGAGAGSRYCACGSA--------
-------CGTCACGCATGACTGCA
 A G T C A C T G A C T G C T G A A C T G C G T A A C T G A T C G C T A G A G C T A G T C C T G A A G T C A C T G A T G C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C C A T G G C A T G A T C T G C A G A T C C A T G A T G C G C T A G A C T A T C G T C G A T A G C G A C T C A T G T G A C G T C A

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:9
Score:0.48
Offset:9
Orientation:reverse strand
Alignment:CGGAGAGSRYCACGSA-
---------GCACGTNC
 A G T C A C T G A C T G C T G A A C T G C G T A A C T G A T C G C T A G A G C T A G T C C T G A A G T C A C T G A T G C C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G T C C G T A A G T C C T A G A G C T T G A C A T G C

MZF1/MA0056.1/Jaspar

Match Rank:10
Score:0.47
Offset:0
Orientation:forward strand
Alignment:CGGAGAGSRYCACGSA
TGGGGA----------
 A G T C A C T G A C T G C T G A A C T G C G T A A C T G A T C G C T A G A G C T A G T C C T G A A G T C A C T G A T G C C T G A
A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T