Information for 11-GCAAATTCCCAGC (Motif 25)

C T A G A G T C C G T A C G T A C G T A C G A T C G A T A T G C A G T C A G T C C G T A A C T G A G T C
Reverse Opposite:
A C T G A G T C A C G T A C T G A C T G A T C G C G T A C G T A A C G T A C G T A C G T A C T G A G T C
p-value:1e-8
log p-value:-2.020e+01
Information Content per bp:1.934
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.2 +/- 25.8bp
Average Position of motif in Background41.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:1
Score:0.72
Offset:0
Orientation:forward strand
Alignment:GCAAATTCCCAGC
GGAAATTCCC---
 C T A G A G T C C G T A C G T A C G T A C G A T C G A T A T G C A G T C A G T C C G T A A C T G A G T C
A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C A C G T A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:2
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GCAAATTCCCAGC
GGAAATTCCC---
 C T A G A G T C C G T A C G T A C G T A C G A T C G A T A T G C A G T C A G T C C G T A A C T G A G T C
A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C A C G T A C G T A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:3
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GCAAATTCCCAGC
GGGAAATCCCCN--
 A C G T C T A G A G T C C G T A C G T A C G T A C G A T C G A T A T G C A G T C A G T C C G T A A C T G A G T C
C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:4
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GCAAATTCCCAGC
GGAAATCCCC---
 C T A G A G T C C G T A C G T A C G T A C G A T C G A T A T G C A G T C A G T C C G T A A C T G A G T C
C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C A C G T A C G T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:5
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GCAAATTCCCAGC-
---AAATCACAGCA
 C T A G A G T C C G T A C G T A C G T A C G A T C G A T A T G C A G T C A G T C C G T A A C T G A G T C A C G T
A C G T A C G T A C G T T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:GCAAATTCCCAGC--
-----TGCCCAGNHW
 C T A G A G T C C G T A C G T A C G T A C G A T C G A T A T G C A G T C A G T C C G T A A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

REL/MA0101.1/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GCAAATTCCCAGC
GGAAANCCCC---
 C T A G A G T C C G T A C G T A C G T A C G A T C G A T A T G C A G T C A G T C C G T A A C T G A G T C
A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C A C G T A C G T A C G T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:8
Score:0.59
Offset:3
Orientation:forward strand
Alignment:GCAAATTCCCAGC-----
---ATTTCCCAGVAKSCY
 C T A G A G T C C G T A C G T A C G T A C G A T C G A T A T G C A G T C A G T C C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:9
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GCAAATTCCCAGC
---HTTTCCCASG
 C T A G A G T C C G T A C G T A C G T A C G A T C G A T A T G C A G T C A G T C C G T A A C T G A G T C
A C G T A C G T A C G T G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:10
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GCAAATTCCCAGC
---AAATCACTGC
 C T A G A G T C C G T A C G T A C G T A C G A T C G A T A T G C A G T C A G T C C G T A A C T G A G T C
A C G T A C G T A C G T T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C