p-value: | 1e-9 |
log p-value: | -2.118e+01 |
Information Content per bp: | 1.731 |
Number of Target Sequences with motif | 9.0 |
Percentage of Target Sequences with motif | 1.32% |
Number of Background Sequences with motif | 29.4 |
Percentage of Background Sequences with motif | 0.06% |
Average Position of motif in Targets | 59.7 +/- 20.5bp |
Average Position of motif in Background | 48.1 +/- 27.7bp |
Strand Bias (log2 ratio + to - strand density) | 1.8 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer
Match Rank: | 1 |
Score: | 0.57 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | CTGCCATTGCYCATGT --NCCATTGTTC---- |
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SOX4/MA0867.1/Jaspar
Match Rank: | 2 |
Score: | 0.56 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----CTGCCATTGCYCATGT AACACTGCAATTGTTC---- |
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Ddit3::Cebpa/MA0019.1/Jaspar
Match Rank: | 3 |
Score: | 0.56 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --CTGCCATTGCYCATGT AGATGCAATCCC------ |
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SOX9/MA0077.1/Jaspar
Match Rank: | 4 |
Score: | 0.56 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | CTGCCATTGCYCATGT ---CCATTGTTC---- |
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GFY(?)/Promoter/Homer
Match Rank: | 5 |
Score: | 0.55 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -CTGCCATTGCYCATGT ACTACAATTCCC----- |
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Sox2/MA0143.3/Jaspar
Match Rank: | 6 |
Score: | 0.55 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | CTGCCATTGCYCATGT ---CCTTTGTT----- |
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Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer
Match Rank: | 7 |
Score: | 0.54 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | CTGCCATTGCYCATGT --NCCATTGTTY---- |
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PB0070.1_Sox30_1/Jaspar
Match Rank: | 8 |
Score: | 0.54 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CTGCCATTGCYCATGT ANNTCCATTGTTCNNN- |
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Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer
Match Rank: | 9 |
Score: | 0.53 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | CTGCCATTGCYCATGT ---CCWTTGTY----- |
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YY2/MA0748.1/Jaspar
Match Rank: | 10 |
Score: | 0.53 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --CTGCCATTGCYCATGT GTCCGCCATTA------- |
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