Information for 2-TCAGCACCAAGGCCAG (Motif 2)

A C G T A G T C C T G A A T C G A T G C C G T A T A G C A G T C G C T A C G T A A T C G A C T G T G A C T A G C C G T A C T A G
Reverse Opposite:
A G T C A C G T A C T G A C T G A G T C A T G C C G A T C A G T A C T G A C T G A C G T A T C G A T G C A G C T A C T G C G T A
p-value:1e-16
log p-value:-3.717e+01
Information Content per bp:1.776
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.62%
Number of Background Sequences with motif12.2
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets52.0 +/- 24.1bp
Average Position of motif in Background43.7 +/- 26.6bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:1
Score:0.85
Offset:0
Orientation:reverse strand
Alignment:TCAGCACCAAGGCCAG----
TCAGCACCATGGACAGCTCC
 A C G T A G T C C T G A A T C G A T G C C G T A T A G C A G T C G C T A C G T A A T C G A C T G T G A C T A G C C G T A C T A G A C G T A C G T A C G T A C G T
A G C T G A T C C T G A T C A G T A G C C T G A A T G C G A T C G C T A G A C T C T A G C T A G G T C A A T G C C G T A T C A G G T A C C A G T T A G C G A T C

REST/MA0138.2/Jaspar

Match Rank:2
Score:0.85
Offset:-1
Orientation:forward strand
Alignment:-TCAGCACCAAGGCCAG----
TTCAGCACCATGGACAGCGCC
 A C G T A C G T A G T C C T G A A T C G A T G C C G T A T A G C A G T C G C T A C G T A A T C G A C T G T G A C T A G C C G T A C T A G A C G T A C G T A C G T A C G T
C A G T A G C T G A T C T C G A T A C G A T G C C G T A A T G C G A T C G C T A G A C T C T A G T C A G G T C A A T G C G C T A T C A G G T A C C A T G T A G C G A T C

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:3
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----TCAGCACCAAGGCCAG
TGAGTCAGCA----------
 A C G T A C G T A C G T A C G T A C G T A G T C C T G A A T C G A T G C C G T A T A G C A G T C G C T A C G T A A T C G A C T G T G A C T A G C C G T A C T A G
G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NRL/MA0842.1/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TCAGCACCAAGGCCAG
GTCAGCANNTN------
 A C G T A C G T A G T C C T G A A T C G A T G C C G T A T A G C A G T C G C T A C G T A A T C G A C T G T G A C T A G C C G T A C T A G
T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T A C G T A C G T A C G T A C G T A C G T A C G T

MAFK/MA0496.1/Jaspar

Match Rank:5
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----TCAGCACCAAGGCCAG
CTGAGTCAGCAATTT------
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C T G A A T C G A T G C C G T A T A G C A G T C G C T A C G T A A T C G A C T G T G A C T A G C C G T A C T A G
G T A C G C A T C T A G C G T A T A C G A G C T G T A C C G T A A C T G A T G C G C T A C G T A G C A T G C A T G C A T A C G T A C G T A C G T A C G T A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:6
Score:0.58
Offset:7
Orientation:forward strand
Alignment:TCAGCACCAAGGCCAG-
-------CAAGGHCANV
 A C G T A G T C C T G A A T C G A T G C C G T A T A G C A G T C G C T A C G T A A T C G A C T G T G A C T A G C C G T A C T A G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

Mafb/MA0117.2/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TCAGCACCAAGGCCAG
NGTCAGCANTTT------
 A C G T A C G T A C G T A G T C C T G A A T C G A T G C C G T A T A G C A G T C G C T A C G T A A T C G A C T G T G A C T A G C C G T A C T A G
G T C A T A C G A G C T G T A C C T G A C A T G T A G C C T G A G C A T C G A T G C A T G C A T A C G T A C G T A C G T A C G T A C G T A C G T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:8
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----TCAGCACCAAGGCCAG
SCTGTCARCACC--------
 A C G T A C G T A C G T A C G T A C G T A G T C C T G A A T C G A T G C C G T A T A G C A G T C G C T A C G T A A T C G A C T G T G A C T A G C C G T A C T A G
T A G C G A T C C G A T C A T G G C A T A G T C G T C A C T G A A G T C C T G A T A G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----TCAGCACCAAGGCCAG
HWWGTCAGCAWWTTT-----
 A C G T A C G T A C G T A C G T A C G T A G T C C T G A A T C G A T G C C G T A T A G C A G T C G C T A C G T A A T C G A C T G T G A C T A G C C G T A C T A G
G T A C C G T A C G T A T A C G G C A T G T A C C G T A C A T G A G T C C G T A C G T A C G A T G C A T G C A T G A C T A C G T A C G T A C G T A C G T A C G T

MAFF/MA0495.1/Jaspar

Match Rank:10
Score:0.54
Offset:-6
Orientation:forward strand
Alignment:------TCAGCACCAAGGCCAG
GCTGAGTCAGCAATTTTT----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C T G A A T C G A T G C C G T A T A G C A G T C G C T A C G T A A T C G A C T G T G A C T A G C C G T A C T A G
A T C G G T A C G C A T C T A G C G T A T A C G G C A T G T A C C G T A C A T G A G T C C G T A C G T A G C A T G C A T G C A T G A C T G C A T A C G T A C G T A C G T A C G T