Information for 6-TGCTGCTGTGCCT (Motif 17)

A G C T A C T G A T G C A G C T A T C G A G T C A C G T A C T G A C G T A C T G A G T C A T G C A C G T
Reverse Opposite:
C G T A A T C G A C T G A G T C C G T A A G T C C G T A A C T G A T G C C T G A A T C G A G T C C T G A
p-value:1e-9
log p-value:-2.262e+01
Information Content per bp:1.896
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets45.8 +/- 24.2bp
Average Position of motif in Background59.6 +/- 14.4bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0207.1_Zic3_2/Jaspar

Match Rank:1
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TGCTGCTGTGCCT
NNTCCTGCTGTGNNN
 A C G T A C G T A G C T A C T G A T G C A G C T A T C G A G T C A C G T A C T G A C G T A C T G A G T C A T G C A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.65
Offset:5
Orientation:reverse strand
Alignment:TGCTGCTGTGCCT--
-----CTGTTCCTGG
 A G C T A C T G A T G C A G C T A T C G A G T C A C G T A C T G A C G T A C T G A G T C A T G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.65
Offset:4
Orientation:forward strand
Alignment:TGCTGCTGTGCCT
----GCTGTG---
 A G C T A C T G A T G C A G C T A T C G A G T C A C G T A C T G A C G T A C T G A G T C A T G C A C G T
A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TGCTGCTGTGCCT
CCCCCTGCTGTG---
 A C G T A C G T A G C T A C T G A T G C A G C T A T C G A G T C A C G T A C T G A C G T A C T G A G T C A T G C A C G T
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----TGCTGCTGTGCCT--
GAGCCTGGTACTGWGCCTGR
 A C G T A C G T A C G T A C G T A C G T A G C T A C T G A T G C A G C T A T C G A G T C A C G T A C T G A C G T A C T G A G T C A T G C A C G T A C G T A C G T
T A C G C T G A C A T G G A T C G T A C G C A T T C A G T A C G A G C T G T C A G A T C G C A T T A C G C G T A C T A G G A T C G A T C C G A T A C T G T C A G

PB0205.1_Zic1_2/Jaspar

Match Rank:6
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TGCTGCTGTGCCT
TNTCCTGCTGTGNNG
 A C G T A C G T A G C T A C T G A T G C A G C T A T C G A G T C A C G T A C T G A C G T A C T G A G T C A T G C A C G T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

PB0051.1_Osr2_1/Jaspar

Match Rank:7
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TGCTGCTGTGCCT
CNNNGCTACTGTANNN
 A C G T A C G T A C G T A G C T A C T G A T G C A G C T A T C G A G T C A C G T A C T G A C G T A C T G A G T C A T G C A C G T
G A T C C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C A T G A C G T C G T A A G T C C G T A C G A T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:8
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----TGCTGCTGTGCCT
GGCCYCCTGCTGDGH--
 A C G T A C G T A C G T A C G T A G C T A C T G A T G C A G C T A T C G A G T C A C G T A C T G A C G T A C T G A G T C A T G C A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T A C G T

PB0050.1_Osr1_1/Jaspar

Match Rank:9
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TGCTGCTGTGCCT
TNNTGCTACTGTNNNN
 A C G T A C G T A C G T A G C T A C T G A T G C A G C T A T C G A G T C A C G T A C T G A C G T A C T G A G T C A T G C A C G T
G A C T C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C T A G A C G T C G T A G C T A C G T A C G A T

PB0206.1_Zic2_2/Jaspar

Match Rank:10
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TGCTGCTGTGCCT
TCNCCTGCTGNGNNN
 A C G T A C G T A G C T A C T G A T G C A G C T A T C G A G T C A C G T A C T G A C G T A C T G A G T C A T G C A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G