Information for 5-GAACAAGCCCAAA (Motif 16)

A T C G T C G A C G T A A G T C G T C A C T G A A C T G G A T C A T G C G A T C C T G A C T G A T C G A
Reverse Opposite:
A G C T A G C T A G C T C A T G A T C G C A T G G T A C G A C T A C G T A C T G A C G T A G C T A T G C
p-value:1e-10
log p-value:-2.344e+01
Information Content per bp:1.725
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.91%
Number of Background Sequences with motif71.3
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets42.1 +/- 27.3bp
Average Position of motif in Background47.8 +/- 24.9bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----GAACAAGCCCAAA
CCAGGAACAG-------
 A C G T A C G T A C G T A C G T A T C G T C G A C G T A A G T C G T C A C T G A A C T G G A T C A T G C G A T C C T G A C T G A T C G A
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0200.1_Zfp187_2/Jaspar

Match Rank:2
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----GAACAAGCCCAAA
NNAGGGACAAGGGCNC-
 A C G T A C G T A C G T A C G T A T C G T C G A C G T A A G T C G T C A C T G A A C T G G A T C A T G C G A T C C T G A C T G A T C G A
A G C T C G A T C T G A C A T G C T A G C T A G C G T A A G T C T C G A C T G A C T A G C T A G C A T G A G T C G A C T G T A C A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:3
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GAACAAGCCCAAA
-AACAAT------
 A T C G T C G A C G T A A G T C G T C A C T G A A C T G G A T C A T G C G A T C C T G A C T G A T C G A
A C G T T C G A C G T A G A T C C T G A T G C A C G A T A C G T A C G T A C G T A C G T A C G T A C G T

PB0151.1_Myf6_2/Jaspar

Match Rank:4
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GAACAAGCCCAAA
AGCAACAGCCGCACC
 A C G T A C G T A T C G T C G A C G T A A G T C G T C A C T G A A C T G G A T C A T G C G A T C C T G A C T G A T C G A
T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C

Klf12/MA0742.1/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GAACAAGCCCAAA--
GACCACGCCCTTATT
 A T C G T C G A C G T A A G T C G T C A C T G A A C T G G A T C A T G C G A T C C T G A C T G A T C G A A C G T A C G T
C A T G T C G A G T A C T A G C T G C A G T A C C T A G A G T C A G T C A G T C G C A T G C A T G C T A G C A T G C A T

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GAACAAGCCCAAA---
--ACATGCCCGGGCAT
 A T C G T C G A C G T A A G T C G T C A C T G A A C T G G A T C A T G C G A T C C T G A C T G A T C G A A C G T A C G T A C G T
A C G T A C G T C T G A T A G C G C T A C G A T A T C G A G T C G A T C G A T C C T A G T C A G T C A G G T A C G C T A C A G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:7
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GAACAAGCCCAAA
RNAACAATGG----
 A C G T A T C G T C G A C G T A A G T C G T C A C T G A A C T G G A T C A T G C G A T C C T G A C T G A T C G A
T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G A C G T A C G T A C G T A C G T

p73(p53)/Trachea-p73-ChIP-Seq(PRJNA310161)/Homer

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GAACAAGCCCAAA------
NRRRCAWGTCCDGRCATGYY
 A C G T A T C G T C G A C G T A A G T C G T C A C T G A A C T G G A T C A T G C G A T C C T G A C T G A T C G A A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C T G A C T A G C T G A A G T C G C T A C G A T A T C G G A C T G A T C A G T C C T G A C T A G C T A G A G T C G C T A C G A T C T A G G A T C G A T C

TP53/MA0106.3/Jaspar

Match Rank:9
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GAACAAGCCCAAA------
-AACATGCCCGGGCATGTC
 A T C G T C G A C G T A A G T C G T C A C T G A A C T G G A T C A T G C G A T C C T G A C T G A T C G A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C T G A C T G A G A T C C G T A G C A T T C A G G A T C G A T C A G T C C T A G C T A G C T A G A T G C G C T A G C A T C T A G G A C T G A T C

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GAACAAGCCCAAA
GAACAATGGN---
 A T C G T C G A C G T A A G T C G T C A C T G A A C T G G A T C A T G C G A T C C T G A C T G A T C G A
C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G A C G T A C G T A C G T