Information for 12-STCTCCAGCAGCYYCT (Motif 14)

A T C G C G A T A G T C A C G T A G T C A G T C C G T A A C T G A G T C C G T A A C T G A G T C A G C T A G C T A G T C G C A T
Reverse Opposite:
C G T A A C T G C T A G C T G A A C T G A G T C A C G T A C T G A G T C A C G T A C T G T C A G G T C A A C T G C G T A A T G C
p-value:1e-11
log p-value:-2.555e+01
Information Content per bp:1.826
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets54.7 +/- 10.0bp
Average Position of motif in Background49.4 +/- 23.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:1
Score:0.64
Offset:1
Orientation:forward strand
Alignment:STCTCCAGCAGCYYCT
-ADGGYAGYAGCATCT
 A T C G C G A T A G T C A C G T A G T C A G T C C G T A A C T G A G T C C G T A A C T G A G T C A G C T A G C T A G T C G C A T
A C G T C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T

PB0003.1_Ascl2_1/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:forward strand
Alignment:STCTCCAGCAGCYYCT-
CTCAGCAGCTGCTACTG
 A T C G C G A T A G T C A C G T A G T C A G T C C G T A A C T G A G T C C G T A A C T G A G T C A G C T A G C T A G T C G C A T A C G T
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:3
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:STCTCCAGCAGCYYCT
-----CAGCTGNT---
 A T C G C G A T A G T C A C G T A G T C A G T C C G T A A C T G A G T C C G T A A C T G A G T C A G C T A G C T A G T C G C A T
A C G T A C G T A C G T A C G T A C G T G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:4
Score:0.62
Offset:6
Orientation:forward strand
Alignment:STCTCCAGCAGCYYCT
------AGCAGCTGCT
 A T C G C G A T A G T C A C G T A G T C A G T C C G T A A C T G A G T C C G T A A C T G A G T C A G C T A G C T A G T C G C A T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:5
Score:0.61
Offset:3
Orientation:forward strand
Alignment:STCTCCAGCAGCYYCT
---AGCAGCTGCTNN-
 A T C G C G A T A G T C A C G T A G T C A G T C C G T A A C T G A G T C C G T A A C T G A G T C A G C T A G C T A G T C G C A T
A C G T A C G T A C G T C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C A C G T

Myod1/MA0499.1/Jaspar

Match Rank:6
Score:0.61
Offset:3
Orientation:forward strand
Alignment:STCTCCAGCAGCYYCT
---TGCAGCTGTCCCT
 A T C G C G A T A G T C A C G T A G T C A G T C C G T A A C T G A G T C C G T A A C T G A G T C A G C T A G C T A G T C G C A T
A C G T A C G T A C G T G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T

Myog/MA0500.1/Jaspar

Match Rank:7
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:STCTCCAGCAGCYYCT
--NNGCAGCTGTC---
 A T C G C G A T A G T C A C G T A G T C A G T C C G T A A C T G A G T C C G T A A C T G A G T C A G C T A G C T A G T C G C A T
A C G T A C G T A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C A C G T A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.60
Offset:4
Orientation:forward strand
Alignment:STCTCCAGCAGCYYCT
----NCAGCTGCTG--
 A T C G C G A T A G T C A C G T A G T C A G T C C G T A A C T G A G T C C G T A A C T G A G T C A G C T A G C T A G T C G C A T
A C G T A C G T A C G T A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G A C G T A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:9
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:STCTCCAGCAGCYYCT
--NNGCAGCTGTT---
 A T C G C G A T A G T C A C G T A G T C A G T C C G T A A C T G A G T C C G T A A C T G A G T C A G C T A G C T A G T C G C A T
A C G T A C G T A T G C G C A T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T A C G T A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:10
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:STCTCCAGCAGCYYCT
------CGCAGCTGCG
 A T C G C G A T A G T C A C G T A G T C A G T C C G T A A C T G A G T C C G T A A C T G A G T C A G C T A G C T A G T C G C A T
A C G T A C G T A C G T A C G T A C G T A C G T T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G