Information for 6-GGAGCCACAA (Motif 16)

C T A G C A T G C G T A A C T G A G T C A G T C G T C A A G T C C G T A C G T A
Reverse Opposite:
A C G T A C G T C T A G A C G T C T A G T C A G G T A C C G A T G T A C A G T C
p-value:1e-12
log p-value:-2.810e+01
Information Content per bp:1.833
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.65%
Number of Background Sequences with motif129.2
Percentage of Background Sequences with motif0.28%
Average Position of motif in Targets42.4 +/- 31.0bp
Average Position of motif in Background48.3 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)-0.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1/MA0002.2/Jaspar

Match Rank:1
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:GGAGCCACAA--
-AAACCACAGAN
 C T A G C A T G C G T A A C T G A G T C A G T C G T C A A G T C C G T A C G T A A C G T A C G T
A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:2
Score:0.67
Offset:1
Orientation:forward strand
Alignment:GGAGCCACAA-
-AAACCACANN
 C T A G C A T G C G T A A C T G A G T C A G T C G T C A A G T C C G T A C G T A A C G T
A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:3
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GGAGCCACAA--
NWAACCACADNN
 C T A G C A T G C G T A A C T G A G T C A G T C G T C A A G T C C G T A C G T A A C G T A C G T
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

POL013.1_MED-1/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GGAGCCACAA
CGGAGC-----
 A C G T C T A G C A T G C G T A A C T G A G T C A G T C G T C A A G T C C G T A C G T A
A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GGAGCCACAA
NAAACCACAG
 C T A G C A T G C G T A A C T G A G T C A G T C G T C A A G T C C G T A C G T A
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:6
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:GGAGCCACAA---
---RNAACAATGG
 C T A G C A T G C G T A A C T G A G T C A G T C G T C A A G T C C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G

PB0113.1_E2F3_2/Jaspar

Match Rank:7
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----GGAGCCACAA--
AGCTCGGCGCCAAAAGC
 A C G T A C G T A C G T A C G T A C G T C T A G C A T G C G T A A C T G A G T C A G T C G T C A A G T C C G T A C G T A A C G T A C G T
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C

RUNX3/MA0684.1/Jaspar

Match Rank:8
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GGAGCCACAA-
-AAACCGCAAA
 C T A G C A T G C G T A A C T G A G T C A G T C G T C A A G T C C G T A C G T A A C G T
A C G T G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:9
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GGAGCCACAA-
-AAACCACAGC
 C T A G C A T G C G T A A C T G A G T C A G T C G T C A A G T C C G T A C G T A A C G T
A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GGAGCCACAA---
ARGAGGMCAAAATGW
 A C G T A C G T C T A G C A T G C G T A A C T G A G T C A G T C G T C A A G T C C G T A C G T A A C G T A C G T A C G T
T G C A C T A G C T A G C T G A C A T G A C T G T G C A G A T C G T C A T G C A G T C A G T C A A G C T C T A G G C A T