Information for 15-CAATTYTRTGAKCASA (Motif 15)

G T A C G T C A C G T A A G C T A G C T G A C T C A G T T C A G C G A T A C T G C T G A A C G T A G T C G T C A T A C G G T C A
Reverse Opposite:
A C G T A T G C C A G T T C A G T G C A A G C T G T A C C G T A A G T C G T C A C T G A C T G A C T G A G C A T A C G T A C T G
p-value:1e-12
log p-value:-2.845e+01
Information Content per bp:1.610
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.95%
Number of Background Sequences with motif54.1
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets54.7 +/- 26.5bp
Average Position of motif in Background48.7 +/- 27.6bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0068.1_Hoxc13/Jaspar

Match Rank:1
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CAATTYTRTGAKCASA
NAATTTTACGAGNTNN
 G T A C G T C A C G T A A G C T A G C T G A C T C A G T T C A G C G A T A C T G C T G A A C G T A G T C G T C A T A C G G T C A
G C T A C T G A C G T A C G A T C G A T C G A T C G A T C T G A G A T C C T A G C T G A A T C G T G A C C G A T C G A T C G A T

Hoxa11/MA0911.1/Jaspar

Match Rank:2
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CAATTYTRTGAKCASA
-ANTTTTACGACC---
 G T A C G T C A C G T A A G C T A G C T G A C T C A G T T C A G C G A T A C T G C T G A A C G T A G T C G T C A T A C G G T C A
A C G T G C T A C G T A C G A T C G A T G C A T G C A T G C T A G A T C C T A G T C G A A G T C G A T C A C G T A C G T A C G T

PH0012.1_Cdx1/Jaspar

Match Rank:3
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CAATTYTRTGAKCASA
NAATTTTATTACCTNN
 G T A C G T C A C G T A A G C T A G C T G A C T C A G T T C A G C G A T A C T G C T G A A C G T A G T C G T C A T A C G G T C A
C G A T G T C A T C G A C G A T C G A T C G A T C G A T C G T A A G C T C A G T C T G A A G T C G A T C A C G T G A C T G C T A

RXRA::VDR/MA0074.1/Jaspar

Match Rank:4
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CAATTYTRTGAKCASA
TGAACCCGATGACCC--
 A C G T G T A C G T C A C G T A A G C T A G C T G A C T C A G T T C A G C G A T A C T G C T G A A C G T A G T C G T C A T A C G G T C A
A G C T C T A G C G T A C G T A A G T C A G C T A G T C A C T G C G A T A G C T C T A G C G T A G T A C A G T C A G T C A C G T A C G T

HOXC10/MA0905.1/Jaspar

Match Rank:5
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CAATTYTRTGAKCASA
--NTTTTACGAC----
 G T A C G T C A C G T A A G C T A G C T G A C T C A G T T C A G C G A T A C T G C T G A A C G T A G T C G T C A T A C G G T C A
A C G T A C G T C G T A C G A T G C A T G C A T C G A T C G T A G A T C C A T G C T G A A G T C A C G T A C G T A C G T A C G T

PH0048.1_Hoxa13/Jaspar

Match Rank:6
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CAATTYTRTGAKCASA
ANATTTTACGAGNNNN
 G T A C G T C A C G T A A G C T A G C T G A C T C A G T T C A G C G A T A C T G C T G A A C G T A G T C G T C A T A C G G T C A
G C T A T C G A C G T A C G A T C A G T C G A T C G A T C T G A A G T C C T A G C T G A A T C G T A C G C G A T G C A T C G A T

Vdr/MA0693.1/Jaspar

Match Rank:7
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CAATTYTRTGAKCASA
TGAACTCNATGAACTC-
 A C G T G T A C G T C A C G T A A G C T A G C T G A C T C A G T T C A G C G A T A C T G C T G A A C G T A G T C G T C A T A C G G T C A
G A C T T C A G T G C A T G C A G A T C A G C T A G T C C T G A C T G A G A C T T C A G T G C A T G C A G T A C A G C T A G T C A C G T

PH0067.1_Hoxc12/Jaspar

Match Rank:8
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CAATTYTRTGAKCASA
GNNNTTTTACGACCTNA
 A C G T G T A C G T C A C G T A A G C T A G C T G A C T C A G T T C A G C G A T A C T G C T G A A C G T A G T C G T C A T A C G G T C A
C T A G G C T A T C G A C G T A C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C A G C T C G T A C T G A

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CAATTYTRTGAKCASA
AAAWWTGCTGACWWD-
 G T A C G T C A C G T A A G C T A G C T G A C T C A G T T C A G C G A T A C T G C T G A A C G T A G T C G T C A T A C G G T C A
C T G A C G T A C G T A G C T A G C A T G C A T T C A G G T A C G C A T C A T G C G T A A T G C G C A T G C A T C A T G A C G T

PB0005.1_Bbx_1/Jaspar

Match Rank:10
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CAATTYTRTGAKCASA
TAATTCAATGAAGTG-
 G T A C G T C A C G T A A G C T A G C T G A C T C A G T T C A G C G A T A C T G C T G A A C G T A G T C G T C A T A C G G T C A
G C A T G C T A C T G A C G A T C G A T T G A C G C T A C G T A C G A T A C T G C G T A G C T A A T C G G C A T C T A G A C G T