Information for 10-CTTYCTGACAGAAAYY (Motif 10)

A G T C C G A T A G C T A G T C G T A C C G A T C T A G G T C A T G A C C G T A T C A G G T C A G C T A C G T A A G C T G A T C
Reverse Opposite:
C T A G T C G A G C A T C G A T C A G T A G T C C G A T A C T G A C G T G A T C C G T A A C T G T C A G T C G A C G T A T C A G
p-value:1e-13
log p-value:-3.207e+01
Information Content per bp:1.563
Number of Target Sequences with motif57.0
Percentage of Target Sequences with motif7.94%
Number of Background Sequences with motif1103.4
Percentage of Background Sequences with motif2.41%
Average Position of motif in Targets50.2 +/- 25.9bp
Average Position of motif in Background50.0 +/- 29.0bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS1/MA0498.2/Jaspar

Match Rank:1
Score:0.63
Offset:4
Orientation:forward strand
Alignment:CTTYCTGACAGAAAYY
----TTGACAG-----
 A G T C C G A T A G C T A G T C G T A C C G A T C T A G G T C A T G A C C G T A T C A G G T C A G C T A C G T A A G C T G A T C
A C G T A C G T A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T A C G T A C G T A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:2
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:CTTYCTGACAGAAAYY
---RHTGWCAR-----
 A G T C C G A T A G C T A G T C G T A C C G A T C T A G G T C A T G A C C G T A T C A G G T C A G C T A C G T A A G C T G A T C
A C G T A C G T A C G T C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A A C G T A C G T A C G T A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:3
Score:0.61
Offset:4
Orientation:forward strand
Alignment:CTTYCTGACAGAAAYY
----TTGACAGC----
 A G T C C G A T A G C T A G T C G T A C C G A T C T A G G T C A T G A C C G T A T C A G G T C A G C T A C G T A A G C T G A T C
A C G T A C G T A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:4
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CTTYCTGACAGAAAYY
--VGCTGWCAVB----
 A G T C C G A T A G C T A G T C G T A C C G A T C T A G G T C A T G A C C G T A T C A G G T C A G C T A C G T A A G C T G A T C
A C G T A C G T T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C A C G T A C G T A C G T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:5
Score:0.57
Offset:5
Orientation:forward strand
Alignment:CTTYCTGACAGAAAYY
-----TGTCANYT---
 A G T C C G A T A G C T A G T C G T A C C G A T C T A G G T C A T G A C C G T A T C A G G T C A G C T A C G T A A G C T G A T C
A C G T A C G T A C G T A C G T A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T A C G T A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:6
Score:0.57
Offset:4
Orientation:forward strand
Alignment:CTTYCTGACAGAAAYY
----TTGACAGG----
 A G T C C G A T A G C T A G T C G T A C C G A T C T A G G T C A T G A C C G T A T C A G G T C A G C T A C G T A A G C T G A T C
A C G T A C G T A C G T A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G A C G T A C G T A C G T A C G T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:7
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CTTYCTGACAGAAAYY
CACTTCCTGT--------
 A C G T A C G T A G T C C G A T A G C T A G T C G T A C C G A T C T A G G T C A T G A C C G T A T C A G G T C A G C T A C G T A A G C T G A T C
A G T C T C G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0105.1_Meis3/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CTTYCTGACAGAAAYY-
-GTATTGACAGGTNNTT
 A G T C C G A T A G C T A G T C G T A C C G A T C T A G G T C A T G A C C G T A T C A G G T C A G C T A C G T A A G C T G A T C A C G T
A C G T C A T G A C G T C G T A C G A T G A C T A C T G C G T A A G T C C T G A C T A G T A C G G A C T T G C A G C T A G A C T G C A T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CTTYCTGACAGAAAYY
---CTTGGCAA-----
 A G T C C G A T A G C T A G T C G T A C C G A T C T A G G T C A T G A C C G T A T C A G G T C A G C T A C G T A A G C T G A T C
A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T

PH0169.1_Tgif1/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CTTYCTGACAGAAAYY-
GATATTGACAGCTGCGT
 A G T C C G A T A G C T A G T C G T A C C G A T C T A G G T C A T G A C C G T A T C A G G T C A G C T A C G T A A G C T G A T C A C G T
C A G T C T G A A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C T A G A T G C A C G T T A C G T A G C A C T G C G A T