Information for 2-BATAGATTGAAATCAG (Motif 5)

A G T C G T C A A G C T C G T A A T C G C G T A A G C T G A C T A T C G C G T A C G T A C T G A A C G T A T G C C G T A T C A G
Reverse Opposite:
A G T C C G A T A T C G G T C A A G C T G A C T G A C T T A G C C T G A C T G A A C G T A T G C G A C T T C G A C A G T T A C G
p-value:1e-19
log p-value:-4.589e+01
Information Content per bp:1.685
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.41%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets39.7 +/- 23.1bp
Average Position of motif in Background60.8 +/- 9.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:1
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:BATAGATTGAAATCAG
-NNAGATNVNWATCTN
 A G T C G T C A A G C T C G T A A T C G C G T A A G C T G A C T A T C G C G T A C G T A C T G A A C G T A T G C C G T A T C A G
A C G T C T A G T G A C C G T A A C T G C G T A A C G T G C T A T C G A A G C T C G A T C G T A A C G T A G T C C G A T T A C G

PH0037.1_Hdx/Jaspar

Match Rank:2
Score:0.64
Offset:3
Orientation:forward strand
Alignment:BATAGATTGAAATCAG----
---AAGGCGAAATCATCGCA
 A G T C G T C A A G C T C G T A A T C G C G T A A G C T G A C T A T C G C G T A C G T A C T G A A C G T A T G C C G T A T C A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C T G A A C T G C A T G G T A C C T A G T G C A C G T A C G T A A C G T A T G C G C T A G A C T G A T C A T C G G T A C T G C A

Gfi1/MA0038.1/Jaspar

Match Rank:3
Score:0.61
Offset:8
Orientation:forward strand
Alignment:BATAGATTGAAATCAG--
--------CAAATCACTG
 A G T C G T C A A G C T C G T A A T C G C G T A A G C T G A C T A T C G C G T A C G T A C T G A A C G T A T G C C G T A T C A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G

Dux/MA0611.1/Jaspar

Match Rank:4
Score:0.59
Offset:8
Orientation:forward strand
Alignment:BATAGATTGAAATCAG
--------CCAATCAA
 A G T C G T C A A G C T C G T A A T C G C G T A A G C T G A C T A T C G C G T A C G T A C T G A A C G T A T G C C G T A T C A G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A

LIN54/MA0619.1/Jaspar

Match Rank:5
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:BATAGATTGAAATCAG
----NATTCAAAT---
 A G T C G T C A A G C T C G T A A T C G C G T A A G C T G A C T A T C G C G T A C G T A C T G A A C G T A T G C C G T A T C A G
A C G T A C G T A C G T A C G T C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:6
Score:0.58
Offset:2
Orientation:forward strand
Alignment:BATAGATTGAAATCAG
--CGGTTTCAAA----
 A G T C G T C A A G C T C G T A A T C G C G T A A G C T G A C T A T C G C G T A C G T A C T G A A C G T A T G C C G T A T C A G
A C G T A C G T T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T A C G T A C G T

PB0174.1_Sox30_2/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:forward strand
Alignment:BATAGATTGAAATCAG-
-TAAGATTATAATACGG
 A G T C G T C A A G C T C G T A A T C G C G T A A G C T G A C T A T C G C G T A C G T A C T G A A C G T A T G C C G T A T C A G A C G T
A C G T G A C T G T C A C G T A A C T G G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G C A T A G C T A C G T A C G

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:8
Score:0.55
Offset:4
Orientation:forward strand
Alignment:BATAGATTGAAATCAG
----WATGCAAATGAG
 A G T C G T C A A G C T C G T A A T C G C G T A A G C T G A C T A T C G C G T A C G T A C T G A A C G T A T G C C G T A T C A G
A C G T A C G T A C G T A C G T G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:9
Score:0.54
Offset:3
Orientation:forward strand
Alignment:BATAGATTGAAATCAG--
---TGACANARRCCAGRC
 A G T C G T C A A G C T C G T A A T C G C G T A A G C T G A C T A T C G C G T A C G T A C T G A A C G T A T G C C G T A T C A G A C G T A C G T
A C G T A C G T A C G T C G A T C T A G C T G A A T G C C T G A T C G A C G T A C T G A T C G A T A G C A G T C C G T A A C T G T C G A A T G C

DUX4/MA0468.1/Jaspar

Match Rank:10
Score:0.53
Offset:4
Orientation:forward strand
Alignment:BATAGATTGAAATCAG
----TAATTTAATCA-
 A G T C G T C A A G C T C G T A A T C G C G T A A G C T G A C T A T C G C G T A C G T A C T G A A C G T A T G C C G T A T C A G
A C G T A C G T A C G T A C G T G C A T C T G A C G T A G A C T A G C T A G C T G T C A C G T A A C G T A G T C C G T A A C G T