Information for 20-CGGCGCGCCGCAG (Motif 33)

A G T C A C T G A T C G A G T C T A C G A G T C A C T G A G T C A G T C A C T G A T G C T C G A C T A G
Reverse Opposite:
A G T C A C G T A T C G A G T C A C T G A C T G A G T C A C T G A G T C A C T G A T G C G T A C A C T G
p-value:1e-8
log p-value:-1.986e+01
Information Content per bp:1.841
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets58.8 +/- 18.9bp
Average Position of motif in Background7.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL006.1_BREu/Jaspar

Match Rank:1
Score:0.67
Offset:1
Orientation:forward strand
Alignment:CGGCGCGCCGCAG
-AGCGCGCC----
 A G T C A C T G A T C G A G T C T A C G A G T C A C T G A G T C A G T C A C T G A T G C T C G A C T A G
A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T A C G T

PB0008.1_E2F2_1/Jaspar

Match Rank:2
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CGGCGCGCCGCAG
ATAAAGGCGCGCGAT--
 A C G T A C G T A C G T A C G T A G T C A C T G A T C G A G T C T A C G A G T C A C T G A G T C A G T C A C T G A T G C T C G A C T A G
C T G A G C A T C G T A G C T A C T G A T A C G A T C G T G A C A T C G A T G C A T C G G A T C T A C G G C T A G C A T A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:3
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CGGCGCGCCGCAG--
TACGCCCCGCCACTCTG
 A C G T A C G T A G T C A C T G A T C G A G T C T A C G A G T C A C T G A G T C A G T C A C T G A T G C T C G A C T A G A C G T A C G T
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

PB0009.1_E2F3_1/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CGGCGCGCCGCAG-
ANCGCGCGCCCTTNN
 A C G T A G T C A C T G A T C G A G T C T A C G A G T C A C T G A G T C A G T C A C T G A T G C T C G A C T A G A C G T
C G T A C G A T T A G C C T A G T A G C A T C G A T G C A C T G A G T C A T G C G A T C C G A T G C A T C G T A A G C T

Sp1(Zf)/Promoter/Homer

Match Rank:5
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CGGCGCGCCGCAG
GGCCCCGCCCCC-
 A G T C A C T G A T C G A G T C T A C G A G T C A C T G A G T C A G T C A C T G A T G C T C G A C T A G
T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C A C G T

PB0199.1_Zfp161_2/Jaspar

Match Rank:6
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----CGGCGCGCCGCAG
NNGCNCTGCGCGGC----
 A C G T A C G T A C G T A C G T A C G T A G T C A C T G A T C G A G T C T A C G A G T C A C T G A G T C A G T C A C T G A T G C T C G A C T A G
T C G A A G T C C A T G G A T C T G C A G A T C C A G T A C T G A G T C C T A G A T G C C T A G C T A G G T A C A C G T A C G T A C G T A C G T

SP2/MA0516.1/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CGGCGCGCCGCAG---
-GCCCCGCCCCCTCCC
 A G T C A C T G A T C G A G T C T A C G A G T C A C T G A G T C A G T C A C T G A T G C T C G A C T A G A C G T A C G T A C G T
A C G T A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C

ZIC4/MA0751.1/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CGGCGCGCCGCAG---
-GACCCCCCGCTGTGC
 A G T C A C T G A T C G A G T C T A C G A G T C A C T G A G T C A G T C A C T G A T G C T C G A C T A G A C G T A C G T A C G T
A C G T A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C

ZIC3/MA0697.1/Jaspar

Match Rank:9
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CGGCGCGCCGCAG---
-GACCCCCCGCTGCGC
 A G T C A C T G A T C G A G T C T A C G A G T C A C T G A G T C A G T C A C T G A T G C T C G A C T A G A C G T A C G T A C G T
A C G T A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C

KLF16/MA0741.1/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CGGCGCGCCGCAG
-GCCACGCCCCC-
 A G T C A C T G A T C G A G T C T A C G A G T C A C T G A G T C A G T C A C T G A T G C T C G A C T A G
A C G T T C A G G T A C G T A C T G C A G T A C C T A G G T A C T A G C G A T C G T A C G A T C A C G T