Information for 4-CACATYAGTYTTTTCT (Motif 4)

A G T C G T C A G T A C C G T A A C G T A G T C C T G A A C T G C A G T A G T C A G C T A C G T A C G T A C G T G A T C C G A T
Reverse Opposite:
C G T A C A T G C G T A G T C A C G T A C T G A T C A G G C T A A G T C A G C T T C A G C G T A C G A T A C T G A C G T A C T G
p-value:1e-19
log p-value:-4.408e+01
Information Content per bp:1.744
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.13%
Number of Background Sequences with motif0.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.4 +/- 17.1bp
Average Position of motif in Background41.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0089.1_Isx/Jaspar

Match Rank:1
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----CACATYAGTYTTTTCT
ACTCCTAATTAGTCGT----
 A C G T A C G T A C G T A C G T A G T C G T C A G T A C C G T A A C G T A G T C C T G A A C T G C A G T A G T C A G C T A C G T A C G T A C G T G A T C C G A T
G C T A T G A C A G C T T G A C G A T C A G C T G C T A C G T A C G A T C A G T C T G A C T A G A C G T A G T C T A C G C G A T A C G T A C G T A C G T A C G T

PH0094.1_Lhx4/Jaspar

Match Rank:2
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----CACATYAGTYTTTTCT
TAAACTAATTAGCTTTG---
 A C G T A C G T A C G T A C G T A G T C G T C A G T A C C G T A A C G T A G T C C T G A A C T G C A G T A G T C A G C T A C G T A C G T A C G T G A T C C G A T
C A G T G T C A C G T A T C G A A T G C G A C T T C G A C T G A A G C T A G C T C T G A A T C G A T G C A C G T C G A T A C G T C T A G A C G T A C G T A C G T

PH0034.1_Gbx2/Jaspar

Match Rank:3
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----CACATYAGTYTTTTCT
AGCGCTAATTAGCGATT---
 A C G T A C G T A C G T A C G T A G T C G T C A G T A C C G T A A C G T A G T C C T G A A C T G C A G T A G T C A G C T A C G T A C G T A C G T G A T C C G A T
C G T A T A C G T G A C T C A G A T G C A G C T G T C A G C T A C A G T A C G T C T G A T A C G A G T C T A C G C T G A A C G T C A G T A C G T A C G T A C G T

NFE2/MA0841.1/Jaspar

Match Rank:4
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:CACATYAGTYTTTTCT
--GATGAGTCATN---
 A G T C G T C A G T A C C G T A A C G T A G T C C T G A A C T G C A G T A G T C A G C T A C G T A C G T A C G T G A T C C G A T
A C G T A C G T T A C G T C G A A C G T C T A G T C G A A T C G C A G T G T A C C T G A A G C T A C T G A C G T A C G T A C G T

GATA3/MA0037.2/Jaspar

Match Rank:5
Score:0.50
Offset:8
Orientation:reverse strand
Alignment:CACATYAGTYTTTTCT
--------TCTTATCT
 A G T C G T C A G T A C C G T A A C G T A G T C C T G A A C T G C A G T A G T C A G C T A C G T A C G T A C G T G A T C C G A T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C A C G T A C G T C G T A A C G T A G T C A C G T

PH0107.1_Msx2/Jaspar

Match Rank:6
Score:0.50
Offset:-5
Orientation:forward strand
Alignment:-----CACATYAGTYTTTTCT
GAAGACCAATTAGCGCT----
 A C G T A C G T A C G T A C G T A C G T A G T C G T C A G T A C C G T A A C G T A G T C C T G A A C T G C A G T A G T C A G C T A C G T A C G T A C G T G A T C C G A T
T C A G T G C A C T G A T A C G C T G A A T G C G A T C C G T A G T C A C G A T G A C T C T G A C A T G G A T C C A T G G A T C A G C T A C G T A C G T A C G T A C G T

PB0137.1_Irf3_2/Jaspar

Match Rank:7
Score:0.49
Offset:4
Orientation:reverse strand
Alignment:CACATYAGTYTTTTCT--
----NNGCACCTTTCTCC
 A G T C G T C A G T A C C G T A A C G T A G T C C T G A A C T G C A G T A G T C A G C T A C G T A C G T A C G T G A T C C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C

PH0033.1_Gbx1/Jaspar

Match Rank:8
Score:0.49
Offset:-5
Orientation:forward strand
Alignment:-----CACATYAGTYTTTTCT
TGCCACTAATTAGTGTA----
 A C G T A C G T A C G T A C G T A C G T A G T C G T C A G T A C C G T A A C G T A G T C C T G A A C T G C A G T A G T C A G C T A C G T A C G T A C G T G A T C C G A T
G C A T C T A G A T G C T G A C T C G A G T A C G A C T G T C A C T G A A G C T A C G T C T G A A C T G A C G T A C T G A C G T G C T A A C G T A C G T A C G T A C G T

JDP2/MA0655.1/Jaspar

Match Rank:9
Score:0.49
Offset:3
Orientation:reverse strand
Alignment:CACATYAGTYTTTTCT
---ATGAGTCAT----
 A G T C G T C A G T A C C G T A A C G T A G T C C T G A A C T G C A G T A G T C A G C T A C G T A C G T A C G T G A T C C G A T
A C G T A C G T A C G T C T G A C G A T C A T G G C T A A T C G G C A T T G A C C T G A A G C T A C G T A C G T A C G T A C G T

PH0031.1_Evx1/Jaspar

Match Rank:10
Score:0.49
Offset:-5
Orientation:reverse strand
Alignment:-----CACATYAGTYTTTTCT
NNNCACTAATTAGTNNT----
 A C G T A C G T A C G T A C G T A C G T A G T C G T C A G T A C C G T A A C G T A G T C C T G A A C T G C A G T A G T C A G C T A C G T A C G T A C G T G A T C C G A T
A C T G G C A T A T G C T A G C T C G A A T G C G A C T G T C A G T C A A C G T A C G T C T G A T A C G A G C T C A G T A G T C C G A T A C G T A C G T A C G T A C G T