Information for 19-AGCCAATCAGGAGGAA (Motif 34)

C G T A A C T G A G T C A G T C C G T A C G T A A C G T A G T C C G T A A C T G A C T G C G T A A C T G A C T G C G T A C G T A
Reverse Opposite:
A C G T A C G T A G T C A G T C A C G T A G T C A G T C A C G T A C T G C G T A A C G T A C G T A C T G A C T G A G T C A C G T
p-value:1e-5
log p-value:-1.227e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.42%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.0 +/- 25.1bp
Average Position of motif in Background49.9 +/- 20.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFY(CCAAT)/Promoter/Homer

Match Rank:1
Score:0.69
Offset:0
Orientation:forward strand
Alignment:AGCCAATCAGGAGGAA
AGCCAATCGG------
 C G T A A C T G A G T C A G T C C G T A C G T A A C G T A G T C C G T A A C T G A C T G C G T A A C T G A C T G C G T A C G T A
T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

NFYB/MA0502.1/Jaspar

Match Rank:2
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----AGCCAATCAGGAGGAA
AAATGGACCAATCAG------
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G A G T C A G T C C G T A C G T A A C G T A G T C C G T A A C T G A C T G C G T A A C T G A C T G C G T A C G T A
T C G A G T C A G T C A A G C T A T C G T C A G C T G A A G T C A G T C C G T A C T G A A C G T T A G C T C G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:3
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---AGCCAATCAGGAGGAA
ACTAGCCAATCA-------
 A C G T A C G T A C G T C G T A A C T G A G T C A G T C C G T A C G T A A C G T A G T C C G T A A C T G A C T G C G T A A C T G A C T G C G T A C G T A
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFYA/MA0060.2/Jaspar

Match Rank:4
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--AGCCAATCAGGAGGAA
TGGACCAATCAGCACTCT
 A C G T A C G T C G T A A C T G A G T C A G T C C G T A C G T A A C G T A G T C C G T A A C T G A C T G C G T A A C T G A C T G C G T A C G T A
A G C T A T C G T C A G C T G A A T G C A G T C C G T A T C G A G A C T T A G C T C G A T C A G T G A C C T G A A T G C A C G T G T A C C G A T

Dux/MA0611.1/Jaspar

Match Rank:5
Score:0.61
Offset:2
Orientation:forward strand
Alignment:AGCCAATCAGGAGGAA
--CCAATCAA------
 C G T A A C T G A G T C A G T C C G T A C G T A A C G T A G T C C G T A A C T G A C T G C G T A A C T G A C T G C G T A C G T A
A C G T A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T

PH0026.1_Duxbl/Jaspar

Match Rank:6
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AGCCAATCAGGAGGAA
CGACCCAATCAACGGTG-
 A C G T A C G T C G T A A C T G A G T C A G T C C G T A C G T A A C G T A G T C C G T A A C T G A C T G C G T A A C T G A C T G C G T A C G T A
A G T C C T A G C T G A A G T C A G T C A G T C G T C A G T C A A G C T A G T C C G T A C T G A A G T C T A C G T C A G G C A T T A C G A C G T

PAX6(Paired,Homeobox)/Forebrain-Pax6-ChIP-Seq(GSE66961)/Homer

Match Rank:7
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---AGCCAATCAGGAGGAA-
NGTGTTCAVTSAAGCGKAAA
 A C G T A C G T A C G T C G T A A C T G A G T C A G T C C G T A C G T A A C G T A G T C C G T A A C T G A C T G C G T A A C T G A C T G C G T A C G T A A C G T
A G C T T A C G C G A T T C A G A G C T A C G T G A T C C T G A T A G C A G C T A T G C C T G A C G T A A T C G A G T C C T A G A C T G C T G A G T C A T C G A

ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer

Match Rank:8
Score:0.55
Offset:8
Orientation:forward strand
Alignment:AGCCAATCAGGAGGAA--
--------ANCAGGAAGT
 C G T A A C T G A G T C A G T C C G T A C G T A A C G T A G T C C G T A A C T G A C T G C G T A A C T G A C T G C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A T G A C T A G C T G C A A C T G A C T G C G T A C G T A T C A G G A C T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--AGCCAATCAGGAGGAA
SCTGTCAVTCAV------
 A C G T A C G T C G T A A C T G A G T C A G T C C G T A C G T A A C G T A G T C C G T A A C T G A C T G C G T A A C T G A C T G C G T A C G T A
T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A A C G T A C G T A C G T A C G T A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AGCCAATCAGGAGGAA
AGCCACTCAAG-----
 C G T A A C T G A G T C A G T C C G T A C G T A A C G T A G T C C G T A A C T G A C T G C G T A A C T G A C T G C G T A C G T A
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T