Information for 13-AAGRCARGATTMY (Motif 26)

C G T A C G T A A C T G C T A G G T A C C G T A C T G A A C T G C G T A A C G T A C G T G T C A A G T C
Reverse Opposite:
C T A G A C G T C G T A C G T A A C G T A G T C A G C T A C G T A C T G A G T C A G T C A C G T A C G T
p-value:1e-8
log p-value:-1.881e+01
Information Content per bp:1.878
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets60.8 +/- 25.1bp
Average Position of motif in Background32.1 +/- 25.3bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mecom/MA0029.1/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:forward strand
Alignment:AAGRCARGATTMY-
AAGATAAGATAACA
 C G T A C G T A A C T G C T A G G T A C C G T A C T G A A C T G C G T A A C G T A C G T G T C A A G T C A C G T
C T G A C G T A A C T G C G T A G A C T C G T A C T G A A C T G C G T A A G C T G C T A C T G A A C G T G T C A

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AAGRCARGATTMY
AAGGCAAGTGT--
 C G T A C G T A A C T G C T A G G T A C C G T A C T G A A C T G C G T A A C G T A C G T G T C A A G T C
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T A C G T

OTX2/MA0712.1/Jaspar

Match Rank:3
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:AAGRCARGATTMY
-----NGGATTAA
 C G T A C G T A A C T G C T A G G T A C C G T A C T G A A C T G C G T A A C G T A C G T G T C A A G T C
A C G T A C G T A C G T A C G T A C G T T G C A T C A G C T A G G T C A A C G T G C A T C G T A C T G A

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:4
Score:0.60
Offset:5
Orientation:forward strand
Alignment:AAGRCARGATTMY
-----RGGATTAR
 C G T A C G T A A C T G C T A G G T A C C G T A C T G A A C T G C G T A A C G T A C G T G T C A A G T C
A C G T A C G T A C G T A C G T A C G T T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:5
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:AAGRCARGATTMY-
----VRGGATTARN
 C G T A C G T A A C T G C T A G G T A C C G T A C T G A A C T G C G T A A C G T A C G T G T C A A G T C A C G T
A C G T A C G T A C G T A C G T T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C

Dmbx1/MA0883.1/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AAGRCARGATTMY----
TGAACCGGATTAATGAA
 C G T A C G T A A C T G C T A G G T A C C G T A C T G A A C T G C G T A A C G T A C G T G T C A A G T C A C G T A C G T A C G T A C G T
G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A

PH0025.1_Dmbx1/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AAGRCARGATTMY----
TGAACCGGATTAATGAA
 C G T A C G T A A C T G C T A G G T A C C G T A C T G A A C T G C G T A A C G T A C G T G T C A A G T C A C G T A C G T A C G T A C G T
G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A

PB0185.1_Tcf1_2/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AAGRCARGATTMY-
TTGCCCGGATTAGG
 C G T A C G T A A C T G C T A G G T A C C G T A C T G A A C T G C G T A A C G T A C G T G T C A A G T C A C G T
C G A T A C G T T C A G G A T C T A G C A G T C T A C G A C T G C T G A C A G T A C G T C G T A C A T G C T A G

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:9
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:AAGRCARGATTMY
----NGGGATTA-
 C G T A C G T A A C T G C T A G G T A C C G T A C T G A A C T G C G T A A C G T A C G T G T C A A G T C
A C G T A C G T A C G T A C G T T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A A C G T

OTX1/MA0711.1/Jaspar

Match Rank:10
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:AAGRCARGATTMY
-----CGGATTAN
 C G T A C G T A A C T G C T A G G T A C C G T A C T G A A C T G C G T A A C G T A C G T G T C A A G T C
A C G T A C G T A C G T A C G T A C G T T A G C T A C G A T C G G T C A A C G T G C A T C G T A C T G A