Information for 15-CACTCTTTCAATC (Motif 21)

A G T C C G T A G T A C A C G T A G T C A C G T A C G T A G C T A G T C C G T A C G T A A G C T A G T C
Reverse Opposite:
A C T G C T G A C G A T A C G T A C T G C T G A C G T A C G T A A C T G C G T A A C T G A C G T C T A G
p-value:1e-8
log p-value:-2.025e+01
Information Content per bp:1.930
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets33.4 +/- 18.6bp
Average Position of motif in Background42.0 +/- 20.8bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:CACTCTTTCAATC--
-----TTTGAAACCG
 A G T C C G T A G T A C A C G T A G T C A C G T A C G T A G C T A G T C C G T A C G T A A G C T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.61
Offset:3
Orientation:forward strand
Alignment:CACTCTTTCAATC--
---NCTGTCAATCAN
 A G T C C G T A G T A C A C G T A G T C A C G T A C G T A G C T A G T C C G T A C G T A A G C T A G T C A C G T A C G T
A C G T A C G T A C G T T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A

PB0028.1_Hbp1_1/Jaspar

Match Rank:3
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CACTCTTTCAATC-
NNCATTCATTCATNNN
 A C G T A C G T A G T C C G T A G T A C A C G T A G T C A C G T A C G T A G C T A G T C C G T A C G T A A G C T A G T C A C G T
T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T

LIN54/MA0619.1/Jaspar

Match Rank:4
Score:0.58
Offset:4
Orientation:forward strand
Alignment:CACTCTTTCAATC
----ATTTGAATT
 A G T C C G T A G T A C A C G T A G T C A C G T A C G T A G C T A G T C C G T A C G T A A G C T A G T C
A C G T A C G T A C G T A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:5
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CACTCTTTCAATC--
---SCTGTCAVTCAV
 A G T C C G T A G T A C A C G T A G T C A C G T A C G T A G C T A G T C C G T A C G T A A G C T A G T C A C G T A C G T
A C G T A C G T A C G T T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:6
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CACTCTTTCAATC-----
--GAAGATCAATCACTAA
 A G T C C G T A G T A C A C G T A G T C A C G T A C G T A G C T A G T C C G T A C G T A A G C T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T A C G C T A G T C G A T A C G G C T A G C A T A G T C C G T A C T G A C A G T G A T C C T G A A T G C A C G T G C T A C G T A

Dux/MA0611.1/Jaspar

Match Rank:7
Score:0.56
Offset:7
Orientation:forward strand
Alignment:CACTCTTTCAATC--
-------CCAATCAA
 A G T C C G T A G T A C A C G T A G T C A C G T A C G T A G C T A G T C C G T A C G T A A G C T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A

NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:8
Score:0.56
Offset:-6
Orientation:reverse strand
Alignment:------CACTCTTTCAATC-
NTGACTCANTTTTTCCANTN
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A G T A C A C G T A G T C A C G T A C G T A G C T A G T C C G T A C G T A A G C T A G T C A C G T
T C G A G C A T A C T G C G T A A T G C G C A T G T A C C G T A A G C T G C A T A G C T A G C T G A C T A G C T A G T C A G T C G C T A A G C T G A C T A T G C

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:9
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CACTCTTTCAATC-
--GSCTGTCACTCA
 A G T C C G T A G T A C A C G T A G T C A C G T A C G T A G C T A G T C C G T A C G T A A G C T A G T C A C G T
A C G T A C G T C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CACTCTTTCAATC--
---ACTTTCACTTTC
 A G T C C G T A G T A C A C G T A G T C A C G T A C G T A G C T A G T C C G T A C G T A A G C T A G T C A C G T A C G T
A C G T A C G T A C G T T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C