Information for 17-GCAATCACCA (Motif 36)

A C T G A G T C C G T A C G T A A C G T A G T C C G T A A G T C A G T C C G T A
Reverse Opposite:
A C G T A C T G A C T G A C G T A C T G C G T A A C G T A C G T A C T G A G T C
p-value:1e-6
log p-value:-1.546e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.0 +/- 26.9bp
Average Position of motif in Background26.4 +/- 15.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Dux/MA0611.1/Jaspar

Match Rank:1
Score:0.72
Offset:0
Orientation:forward strand
Alignment:GCAATCACCA
CCAATCAA--
 A C T G A G T C C G T A C G T A A C G T A G T C C G T A A G T C A G T C C G T A
A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T

PH0037.1_Hdx/Jaspar

Match Rank:2
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----GCAATCACCA--
AAGGCGAAATCATCGCA
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G T A A C G T A G T C C G T A A G T C A G T C C G T A A C G T A C G T
C G T A C T G A A C T G C A T G G T A C C T A G T G C A C G T A C G T A A C G T A T G C G C T A G A C T G A T C A T C G G T A C T G C A

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:3
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----GCAATCACCA
AGATGCAATCCC--
 A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G T A A C G T A G T C C G T A A G T C A G T C C G T A
T C G A C T A G C T G A A G C T A C T G G T A C G T C A T G C A A G C T T G A C T A G C A G T C A C G T A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:4
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GCAATCACCA
CAAATCACTG
 A C T G A G T C C G T A C G T A A C G T A G T C C G T A A G T C A G T C C G T A
A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G

EN2/MA0642.1/Jaspar

Match Rank:5
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GCAATCACCA
CCCAATTAGC-
 A C G T A C T G A G T C C G T A C G T A A C G T A G T C C G T A A G T C A G T C C G T A
T A G C A T G C A G T C T G C A T G C A A C G T A G C T C T G A T A C G A T G C A C G T

ZBTB7C/MA0695.1/Jaspar

Match Rank:6
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GCAATCACCA--
GCGACCACCGAA
 A C T G A G T C C G T A C G T A A C G T A G T C C G T A A G T C A G T C C G T A A C G T A C G T
C T A G T A G C C T A G G T C A G T A C A G T C G T C A G T A C G A T C T C A G G T C A T G C A

FOXH1/MA0479.1/Jaspar

Match Rank:7
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GCAATCACCA
TCCAATCCACA
 A C G T A C T G A G T C C G T A C G T A A C G T A G T C C G T A A G T C A G T C C G T A
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GCAATCACCA
GGCCATTAAC-
 A C G T A C T G A G T C C G T A C G T A A C G T A G T C C G T A A G T C A G T C C G T A
C T A G T A C G G A T C G T A C G C T A A G C T A G C T G T C A T C G A T A G C A C G T

NFYA/MA0060.2/Jaspar

Match Rank:9
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----GCAATCACCA----
TGGACCAATCAGCACTCT
 A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G T A A C G T A G T C C G T A A G T C A G T C C G T A A C G T A C G T A C G T A C G T
A G C T A T C G T C A G C T G A A T G C A G T C C G T A T C G A G A C T T A G C T C G A T C A G T G A C C T G A A T G C A C G T G T A C C G A T

PH0026.1_Duxbl/Jaspar

Match Rank:10
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----GCAATCACCA---
CGACCCAATCAACGGTG
 A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G T A A C G T A G T C C G T A A G T C A G T C C G T A A C G T A C G T A C G T
A G T C C T A G C T G A A G T C A G T C A G T C G T C A G T C A A G C T A G T C C G T A C T G A A G T C T A C G T C A G G C A T T A C G