Information for 7-GATTRAAACCACT (Motif 9)

T A C G C T G A C G A T A C G T T C A G T G C A C G T A C G T A G T A C A G T C C G T A A T G C C G A T
Reverse Opposite:
C G T A A T C G C G A T A C T G A C T G A C G T C G A T A C G T A G T C G T C A C G T A G A C T A T G C
p-value:1e-13
log p-value:-3.205e+01
Information Content per bp:1.750
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.92%
Number of Background Sequences with motif40.1
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets50.1 +/- 22.4bp
Average Position of motif in Background57.7 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:1
Score:0.69
Offset:5
Orientation:forward strand
Alignment:GATTRAAACCACT--
-----AAACCACANN
 T A C G C T G A C G A T A C G T T C A G T G C A C G T A C G T A G T A C A G T C C G T A A T G C C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.66
Offset:4
Orientation:forward strand
Alignment:GATTRAAACCACT-
----NAAACCACAG
 T A C G C T G A C G A T A C G T T C A G T G C A C G T A C G T A G T A C A G T C C G T A A T G C C G A T A C G T
A C G T A C G T A C G T A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GATTRAAACCACT
-ACTGAAACCA--
 T A C G C T G A C G A T A C G T T C A G T G C A C G T A C G T A G T A C A G T C C G T A A T G C C G A T
A C G T G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.64
Offset:5
Orientation:reverse strand
Alignment:GATTRAAACCACT--
-----AAACCACAGC
 T A C G C T G A C G A T A C G T T C A G T G C A C G T A C G T A G T A C A G T C C G T A A T G C C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:5
Score:0.64
Offset:6
Orientation:reverse strand
Alignment:GATTRAAACCACT---
------MRSCACTYAA
 T A C G C T G A C G A T A C G T T C A G T G C A C G T A C G T A G T A C A G T C C G T A A T G C C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A

RUNX1/MA0002.2/Jaspar

Match Rank:6
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:GATTRAAACCACT---
-----AAACCACAGAN
 T A C G C T G A C G A T A C G T T C A G T G C A C G T A C G T A G T A C A G T C C G T A A T G C C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:7
Score:0.63
Offset:4
Orientation:forward strand
Alignment:GATTRAAACCACT---
----NWAACCACADNN
 T A C G C T G A C G A T A C G T T C A G T G C A C G T A C G T A G T A C A G T C C G T A A T G C C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

LIN54/MA0619.1/Jaspar

Match Rank:8
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GATTRAAACCACT
NATTCAAAT----
 T A C G C T G A C G A T A C G T T C A G T G C A C G T A C G T A G T A C A G T C C G T A A T G C C G A T
C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:9
Score:0.61
Offset:6
Orientation:forward strand
Alignment:GATTRAAACCACT---
------AASCACTCAA
 T A C G C T G A C G A T A C G T T C A G T G C A C G T A C G T A G T A C A G T C C G T A A T G C C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:10
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GATTRAAACCACT
CGGTTTCAAA-----
 A C G T A C G T T A C G C T G A C G A T A C G T T C A G T G C A C G T A C G T A G T A C A G T C C G T A A T G C C G A T
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T A C G T A C G T A C G T