Information for 21-AGMTTTGCAGTGRRAT (Motif 30)

C G T A A C T G G T C A A C G T A C G T G C A T C T A G G T A C C G T A T A C G A C G T C A T G C T A G C T A G C G T A A G C T
Reverse Opposite:
C T G A C G A T A G T C A G T C G T A C G T C A A T G C A C G T A C T G A G T C C G T A G T C A C G T A A C G T A G T C A C G T
p-value:1e-10
log p-value:-2.310e+01
Information Content per bp:1.757
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets63.0 +/- 18.2bp
Average Position of motif in Background31.6 +/- 24.9bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GATA3(Zf),DR8/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:1
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AGMTTTGCAGTGRRAT----
AGATSTNDNNDSAGATAASN
 C G T A A C T G G T C A A C G T A C G T G C A T C T A G G T A C C G T A T A C G A C G T C A T G C T A G C T A G C G T A A G C T A C G T A C G T A C G T A C G T
C G T A A C T G C G T A A C G T A T C G C A G T T A G C C G T A T C G A G T A C C T G A T A G C C G T A A C T G C G T A A C G T C G T A C T G A A T C G G C T A

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:AGMTTTGCAGTGRRAT
-CCTTTGATGT-----
 C G T A A C T G G T C A A C G T A C G T G C A T C T A G G T A C C G T A T A C G A C G T C A T G C T A G C T A G C G T A A G C T
A C G T A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T A C G T A C G T A C G T A C G T A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:3
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:AGMTTTGCAGTGRRAT-
NNNANTGCAGTGCNNTT
 C G T A A C T G G T C A A C G T A C G T G C A T C T A G G T A C C G T A T A C G A C G T C A T G C T A G C T A G C G T A A G C T A C G T
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:4
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:AGMTTTGCAGTGRRAT
-CCTTTGAWGT-----
 C G T A A C T G G T C A A C G T A C G T G C A T C T A G G T A C C G T A T A C G A C G T C A T G C T A G C T A G C G T A A G C T
A C G T A T G C A G T C A C G T A C G T A C G T A C T G C G T A C G T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T

OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.55
Offset:2
Orientation:forward strand
Alignment:AGMTTTGCAGTGRRAT-
--ATTTGCATAACAATG
 C G T A A C T G G T C A A C G T A C G T G C A T C T A G G T A C C G T A T A C G A C G T C A T G C T A G C T A G C G T A A G C T A C G T
A C G T A C G T G C T A G C A T G A C T G C A T T C A G G T A C G C T A G C A T C T G A G C T A T A G C G C T A C T G A C G A T C T A G

Nr2e3/MA0164.1/Jaspar

Match Rank:6
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--AGMTTTGCAGTGRRAT
CAAGCTT-----------
 A C G T A C G T C G T A A C T G G T C A A C G T A C G T G C A T C T A G G T A C C G T A T A C G A C G T C A T G C T A G C T A G C G T A A G C T
G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.51
Offset:2
Orientation:forward strand
Alignment:AGMTTTGCAGTGRRAT
--ATTTGCATAA----
 C G T A A C T G G T C A A C G T A C G T G C A T C T A G G T A C C G T A T A C G A C G T C A T G C T A G C T A G C G T A A G C T
A C G T A C G T C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A A C G T A C G T A C G T A C G T

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:8
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:AGMTTTGCAGTGRRAT-
--ATTTGCATAACAAAG
 C G T A A C T G G T C A A C G T A C G T G C A T C T A G G T A C C G T A T A C G A C G T C A T G C T A G C T A G C G T A A G C T A C G T
A C G T A C G T G T C A G A C T G A C T G C A T T C A G T G A C G C T A C G A T C T G A G C T A A T G C G T C A T C G A C G T A T C A G

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:9
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-AGMTTTGCAGTGRRAT
CTCATTTGCATW-----
 A C G T C G T A A C T G G T C A A C G T A C G T G C A T C T A G G T A C C G T A T A C G A C G T C A T G C T A G C T A G C G T A A G C T
A G T C G C A T T G A C G T C A A C G T A G C T C G A T T C A G T G A C G C T A G C A T C G T A A C G T A C G T A C G T A C G T A C G T

GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:10
Score:0.51
Offset:0
Orientation:forward strand
Alignment:AGMTTTGCAGTGRRAT
AGATGKDGAGATAAG-
 C G T A A C T G G T C A A C G T A C G T G C A T C T A G G T A C C G T A T A C G A C G T C A T G C T A G C T A G C G T A A G C T
C G T A A C T G G T C A A C G T A T C G C A G T C T A G T C A G C G T A A C T G C G T A A C G T C G T A C T G A T A C G A C G T